Pedobacter heparinus: Phep_1188
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Entry
Phep_1188 CDS
T00978
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
phe
Pedobacter heparinus
Pathway
phe01501
beta-Lactam resistance
phe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Phep_1188
01503 Cationic antimicrobial peptide (CAMP) resistance
Phep_1188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phe03036
]
Phep_1188
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_1188
01504 Antimicrobial resistance genes [BR:
phe01504
]
Phep_1188
Chromosome and associated proteins [BR:
phe03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Phep_1188
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_1188
Antimicrobial resistance genes [BR:
phe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Phep_1188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
OEP
HlyD_2
VirDNA-topo-I_N
Motif
Other DBs
NCBI-ProteinID:
ACU03406
UniProt:
C6XS61
LinkDB
All DBs
Position
complement(1409158..1410327)
Genome browser
AA seq
389 aa
AA seq
DB search
MKTTIQSFYLLIPVLLIISSCGNSDQKKPGAAADQVQSYPVFTITTQSTDLETDYPATLE
GIQNVDIRPKVDGFIEKIYVDEGATVKKGQLLFSINAPQYEQLVRTATAAISSAEADVNS
AQLQVNKTKPLVDKDIISKYDLDAAQLTLQSRKAALAQARAELVNAKVNLGYTRITSPVD
GVIGSIPFKTGSLVSSSSASPLTTVSNISRVYAYFSMNEKQLLEFSRHYKGTNLATKLKN
IPAVSLVLADGTIYAENGKIESINGLINTSTGSASLRATFSNPATLLRSGASASVRIPQH
LENIILIPQKVTTDLQGKKFVYVLDEKGNVKNTEVEVMELTKGNFYVVTKGLKTGDKVVL
EGFQSLKDGTQIKPEEKSADSVFADLQNK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactacaatccaatctttttatttattaatccctgtattactgatcatcagttca
tgtggcaacagcgatcagaaaaaacccggtgcagctgctgaccaggtacagtcgtacccg
gtttttaccataacaacacaatctaccgacctggaaacagattacccggctacacttgaa
gggattcagaatgtagacatcagaccgaaggtggatggttttattgaaaagatatatgtt
gacgaaggagctaccgttaaaaaaggccagctgctgttcagtatcaatgcaccacaatac
gaacaattggtaagaacagccaccgctgccatcagcagtgccgaggccgatgtaaacagt
gcccagttgcaggttaacaagaccaagcccttggtagataaggacatcatcagcaaatac
gatcttgatgccgcccagttaaccctgcaaagccgcaaggcagccctggcacaagccaga
gcagaactggtaaatgccaaagtaaatttaggctatacccgcatcaccagtcctgttgac
ggtgtaataggcagcattccttttaaaaccggaagcctggtaagtagcagtagcgcaagc
cctttaactacagtatccaacatttccagggtatatgcttatttctctatgaatgaaaag
caactgctggagttttcgcgtcattataaaggcactaaccttgcaaccaaattaaaaaac
atccctgcggtatcattggtgttggcagacggcacaatttatgctgaaaacggtaagata
gaatctataaacggcctgatcaataccagcacgggttcggccagtttaagggctactttt
tcgaacccggcaacgcttttaaggagtggtgcaagtgcatccgtgcggattccgcagcac
ctggagaacatcatccttattccccaaaaggttacgaccgacctgcagggcaaaaaattt
gtgtatgtgctggatgaaaagggaaatgtaaaaaatacggaagtggaggttatggagctt
acgaaaggtaatttttatgtggttaccaaaggccttaagaccggcgataaagtggtactt
gaaggcttccagtccctgaaagatggtacacagatcaaacctgaagaaaaaagtgcagat
tctgtctttgctgatctccaaaacaaataa
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