Pedobacter heparinus: Phep_2067
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Entry
Phep_2067 CDS
T00978
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
phe
Pedobacter heparinus
Pathway
phe00790
Folate biosynthesis
phe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Phep_2067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phe03016
]
Phep_2067
Enzymes [BR:
phe01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Phep_2067
Transfer RNA biogenesis [BR:
phe03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Phep_2067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ACU04272
UniProt:
C6XWX8
LinkDB
All DBs
Position
complement(2385996..2386619)
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AA seq
207 aa
AA seq
DB search
MAHQIPEDGTLLPLMEEFYTIQGEGFNTGKAAYFIRLGGCDVGCHWCDVKESWDAELHPL
TPADAIVAKAESYPGKAVVITGGEPLIYNLDYLTRRLREKGILTFIETSGAYPLSGDWDW
ICLSPKKFKAPRPDITPYANELKVIVFNKSDFEWAEKYAETVSANCKLYLQPEWSKSKEI
TPLIIDYVMANPKWEISLQTHKFLNIP
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcaaataccagaagacggcactttacttcctttaatggaagaattttacacc
atacagggcgaaggatttaataccggaaaagcagcatactttattcgtttaggtggctgc
gacgtaggatgccactggtgtgatgtaaaagaaagctgggatgccgaactgcatccttta
acccccgcggatgccattgtggcaaaagcagaaagttatccgggcaaagcagtagtaatt
accggcggggaacccctcatctataacctggattacctgaccaggaggcttcgtgaaaaa
gggatactgaccttcattgaaacttccggtgcttatccgctttcgggcgactgggactgg
atctgtttatcgcccaagaaatttaaggcacctcgtccggacattacgccttatgccaac
gagcttaaagttattgtgttcaataaaagcgactttgaatgggccgagaaatatgcagaa
acggtttctgcaaactgcaagctctatctgcaaccggaatggtcaaagtccaaagaaatt
acccccctgatcatcgattatgtcatggccaatcccaaatgggaaatatctctgcaaaca
cacaaatttttaaatatcccctag
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