Pedobacter heparinus: Phep_2838
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Entry
Phep_2838 CDS
T00978
Name
(GenBank) Lyase catalytic
KO
K08961
chondroitin-sulfate-ABC endolyase/exolyase [EC:
4.2.2.20
4.2.2.21
]
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Phep_2838
Enzymes [BR:
phe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.20 chondroitin-sulfate-ABC endolyase
Phep_2838
4.2.2.21 chondroitin-sulfate-ABC exolyase
Phep_2838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lyase_catalyt
Lyase_N
Lyase_8
Lyase_8_C
Motif
Other DBs
NCBI-ProteinID:
ACU05037
UniProt:
C6Y1P5
LinkDB
All DBs
Position
complement(3378132..3381365)
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AA seq
1077 aa
AA seq
DB search
MNYRIATLALTLGLSTIAPGLKAQKESVPTFVKDIVTNYLTFEEAQDIANWKSEKGNLSF
SSAHFKDGTQSLLWTYQNGATIEIANLKGLKEAGDFYPGGQPEVYEPSFYKKSHYGGVKM
WLYQEKPSIGKITFQVGSNLQMANTAPKYRFSVNLNFTGWRAVWVNFNEDALVKNYKGSD
EMTSLVALTPSGQSGKIFIDHFMLLSFVSNKRHSDLQFENHKLNLRSGDGYEILAPYQIF
LAKQFNQQVDVKKLTEESKTIADRLEFLILGDKTNDWKKRNTGIEKTIDGKIKGASAIFD
KLGIHKANDFVNGRPLFGIRDEHIPKEGLNYDEAILPTAFPLAMDYRLNGNKTAREKLML
TFDYLQDQGWAAGSAFGTVDHVIKLNPIATAIFLVRDDLKAQNKLKAETDMLIWHTRLGS
MLTIDYTRGENSDKIRGGALAKLITILLMENDSRKQELLQDFKSYMDYVASISPGYSDTF
KPDFSIYHHRGTYLNTYGTNALNTMALIHWLLSGTPYQLSPQTTGNLKQALKRQAEIAYG
VDIHYGAGGRFPLGNSSLDGFTFPALAYMSMNGNTIADKEMAELFNYIYDIAEPDVVARM
LSPVLTYSGTFGTLNLIERLHKMVGAQKHRPADGAVSMPYSGLMAYRQGNAFATVKGYNK
YVWDFESGRGENNLGRYLSHGMLVTAQGDEKMGFKSLGLGLNEGFDWSMLPGATTKMLPA
DKVLYYTKGDQKYIEGKHRNFSESVVASGLQQGTNGLFALDLRDDVFPDEDKSLFDNSFR
ARKTYFFIGNEIICLGSSIQNNDTRYPTVTTLFQYRTDEKRKNSFNGKEISASSSLNQKA
DGGYFTDQNGLHYIIPKGQPIVLGQDKQISYRGANVGDQKSIVLNTSGAYEKTQEVYTKA
WFDHGTNPKDKGYEYEIVLNTPTADLKPYLQNKTYEVMQKNASAHIIRHPLSGITAYAVY
SAAQPLKGTLIHVDRPMLAMVKEQAGHLWLSLADPDIRQPKWNHNMSHMPDSITNGWGTG
SIATLTLKGAWYIAKQLQEVETVSYMNGNTILKVFCKEGKSIDIPLQHRTMDNVDTE
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaactaccggatagccacattggcacttacacttggattaagtacgattgcaccaggc
ctaaaagcacaaaaggaatcagtgccaacttttgtaaaggatattgtgaccaactatctt
acttttgaagaagcgcaggatattgcgaactggaaatcagaaaaaggtaatctctctttt
tcatctgctcattttaaagatggcacgcaatcgctgctgtggacgtatcaaaatggtgcc
actatagaaattgccaatttaaagggcttaaaagaagccggagatttttatcctggcggt
cagcctgaagtttacgaaccgtcgttctacaaaaaatcgcattatggaggtgtaaaaatg
tggttataccaggaaaaaccttccatcggcaaaattacttttcaggtaggcagcaatttg
caaatggcaaatacggctccaaaatatcgtttttcggtaaaccttaactttactggctgg
cgggccgtttgggttaattttaatgaagatgcgctggtaaaaaactacaagggcagtgat
gaaatgaccagtttggtggcacttactccatcggggcaaagtggtaaaatattcatcgac
catttcatgctgctgagttttgtttctaataaacgtcattccgatctgcagtttgaaaac
cataaacttaacctccgctctggtgatggctatgaaatactggcaccttaccaaatattt
ttagccaaacaatttaaccagcaggtagatgttaaaaaactaaccgaagaaagtaagacc
atagcagaccgattggaatttttaatacttggcgataaaaccaacgattggaaaaaacgc
aatacgggcatcgaaaaaacaatagatggtaaaattaaaggtgcttcagctattttcgat
aagcttggaatacataaagcaaacgattttgtaaatggaagacccttatttggcatccgt
gatgaacatatccctaaagaaggtttaaattacgatgaggctatcctgccaactgccttt
cccttagcaatggattacaggcttaatggcaataaaactgccagagaaaaactgatgctg
acctttgattatttacaggaccagggttgggcagcgggcagtgcttttggtacggtagac
catgtgataaagcttaacccgattgcaaccgctatttttttggtaagagatgatctgaaa
gcacaaaataagctaaaagcagaaactgatatgctgatctggcatacccgtttgggcagt
atgttaaccattgattacacacggggagaaaattctgataaaatccgcggaggtgccctg
gccaaactcattaccattttattaatggaaaatgatagccgtaagcaagagttgttgcag
gattttaaaagctacatggattatgtagccagtatttcgcccggctatagtgacacgttt
aaacccgatttttctatttatcaccaccggggaacttatttaaatacttatggtaccaat
gcgctaaacaccatggcactcatccattggctgcttagtggcacaccttatcagctttcg
ccacaaactaccggcaaccttaaacaggcattaaagcgacaggcggaaattgcctatgga
gtagatattcattatggtgccggtgggcgttttccgctgggcaacagctcacttgatggg
tttacctttccggcactggcctatatgagtatgaatggcaataccattgcagacaaagaa
atggctgaactgtttaactatatatacgatattgccgaaccagatgtggtagccagaatg
cttagccccgtgcttacctattcgggtacttttggcaccttaaatttaatagaacgactg
cacaaaatggtaggtgcacaaaaacacagacctgccgatggtgccgtttcaatgccttat
tcgggcttaatggcttaccgccagggcaatgcctttgcaaccgtaaaaggatacaacaaa
tacgtttgggattttgaaagtggcagaggagaaaataatttgggccgttaccttagccac
ggtatgctggtaacggcacagggcgatgaaaaaatgggtttcaaaagtttgggtctgggt
ttgaatgaaggtttcgattggtctatgttgcccggagctacaactaaaatgttaccggca
gacaaagtattgtattatacaaaaggtgaccaaaaatatatagaaggtaaacaccgcaat
ttctctgaaagcgtagtggccagtggactgcaacagggtaccaatggattgtttgcctta
gacctgcgtgatgatgtttttccggatgaagataaatctttgttcgacaacagtttcagg
gcccgaaaaacctatttctttatcggtaatgaaattatttgcctgggttcttccattcaa
aataatgataccaggtacccaactgtaaccacgctgtttcagtaccgaaccgatgaaaaa
cggaaaaacagttttaatggaaaggaaatcagtgcttcttcatcccttaaccaaaaagcc
gatgggggttattttaccgatcagaacggtttgcattacatcattcccaaaggacaacct
attgtgctgggccaggataagcaaatttcttacaggggcgctaatgtaggcgaccaaaag
tcgatcgttttaaacacatccggagcttatgagaaaacacaggaggtatatacaaaagcc
tggtttgatcatggtacaaaccctaaagataaagggtacgaatatgagattgtactgaat
acgccaacagctgacctgaaaccgtacctgcaaaataaaacctatgaggtgatgcaaaaa
aatgcatcagcccatattatcaggcatccattatcgggtattaccgcatacgctgtttat
agtgctgcgcaacccttaaaaggaacgcttattcatgttgacagacctatgctggcaatg
gtaaaagaacaggctgggcatttatggcttagccttgccgatcctgatatcaggcaacca
aaatggaatcacaatatgagccatatgcccgatagcattaccaatggctggggcacaggg
agcatagctacgcttaccctaaaaggggcatggtatattgccaaacagctgcaggaggtg
gaaaccgtaagttacatgaatggtaacactatcttaaaagttttttgtaaagaaggcaaa
agcatagatatccctttacagcaccgtactatggataacgtggatacggaataa
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