Pseudomonas hefeiensis: PSH57_26860 Help Entry PSH57_26860       CDS       T09985                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism phef  Pseudomonas hefeiensis Pathway phef03030   DNA replication phef03410   Base excision repair phef03420   Nucleotide excision repair phef03430   Mismatch repair Brite KEGG Orthology (KO) [BR:phef00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     PSH57_26860 (ligB)    03410 Base excision repair     PSH57_26860 (ligB)    03420 Nucleotide excision repair     PSH57_26860 (ligB)    03430 Mismatch repair     PSH57_26860 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:phef03032]     PSH57_26860 (ligB)    03400 DNA repair and recombination proteins [BR:phef03400]     PSH57_26860 (ligB) Enzymes [BR:phef01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      PSH57_26860 (ligB) DNA replication proteins [BR:phef03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      PSH57_26860 (ligB) DNA repair and recombination proteins [BR:phef03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      PSH57_26860 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      PSH57_26860 (ligB)    MMR (mismatch excision repair)     DNA ligase      PSH57_26860 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       PSH57_26860 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase RNA_ligase HHH_5 HHH_2 Motif Other DBs NCBI-ProteinID:  WLH12382 UniProt:  A0ABY9G9Z9 LinkDB All DBs Position 5948391..5950064 Genome browser AA seq 557 aa AA seqDB search MPPFLYALACLVFIAIPAVAAPCPDWPTERARAEIAALQQQIDTWDDSYHRRGQSLVADE LYDQSHTQLGQWRHCFNLAAPDDPLRSAGGKVLHPVIHTGLKKLKDADAVGAWLHGREDV WAQPKVDGVAVTLVYRKGRLHQAISRGDGVHGHDWTTNARKIGAIPQRLRQPVDLVVQGE LYWRLEAHVQASSGSVNARGTMAGLIARSNLTVHDGVYIGLFAWEWPEGPDTLPEREAAL KALGFADTTGYSQPVQALTDVEHWRDHWYRTPLPFASDGIVLRQSRRPPADRWQARAPFW SVAWKYPYAQALAEVRKVRFKVGRTGRITPVLELEPTLLDDRRIRRVSVSSLKRWEEMDI RPGDRVAISLAGLTIPRLDEVVLRSLERQDVNAPAATDHHFLSCWQATPGCEGQFLARLN WLSGKHGLALPHVGPGTWEKLLAAGRLHGLLDWLTLDAAELANIAGLGERSSTRLLASLD SARQRPFGQWLKALGLPPVGEARLDGPWQALAERNTEQWQAEAGIGPERAAQLRAFFRDP QVLALSEVLRTAGIDGF NT seq 1674 nt NT seq  +upstreamnt  +downstreamnt atgccaccgtttttgtatgcactcgcctgtcttgtattcattgccattccagcggtcgcc gcgccctgtcccgactggcccactgaacgcgcccgggccgagatcgccgcgctgcaacag caaatcgacacctgggacgacagctatcaccgccgcggccagtcgttggtggccgacgaa ctgtatgatcaatcccacacacagttgggccaatggcgccactgcttcaaccttgcagcc cccgatgatcccctgcgctcagcgggcggaaaggtgctgcaccccgttatccataccggc ctgaaaaaactgaaggatgccgacgccgtgggggcctggctgcacggtcgagaggacgtc tgggcacagccgaaagtcgacggtgtggcggtaaccctggtctatcgcaagggtcgcctg catcaggcaatcagccggggtgatggcgtccacggacatgactggaccaccaatgcgcgc aagatcggcgccatcccgcagcgactgcgccagcctgtggacctggtcgtccagggcgag ttgtactggcgcctggaggcccatgtccaagccagcagcggcagcgtgaacgcccgcgga accatggcgggcttgatcgcacggagcaatttgacggtgcacgatggggtgtatatcggc ctgtttgcctgggagtggcctgagggcccggacaccctgcccgagcgggaggcggccttg aaggcgcttggctttgccgacacgaccggctacagccagcccgtccaggcattgaccgac gtcgagcattggcgcgaccactggtatcgcacaccgctgccgtttgccagcgacggaatc gtcctgcgccagagtcgccgcccacccgccgaccgctggcaggcccgggcaccgttctgg agcgtggcctggaagtacccgtatgcccaggccttggccgaagtgcgcaaggtccgcttc aaggtcggtcgtaccgggcgcatcacccccgtattggagcttgaacctaccctgctcgac gaccgacggattcgccgggtgagcgtcagctccctcaagcgttgggaagagatggacatc cgccccggcgatcgggtcgccatcagcctggccgggctgaccatcccgcgactcgacgag gttgtgctacgcagcctcgagcgccaggacgtcaatgcccctgcggcgaccgaccatcac ttcttgagttgctggcaagcgacgccaggctgcgaaggccagttcctcgcacgcctgaac tggctcagcggcaagcacgggctcgccctaccccatgtcggccccggcacctgggaaaaa ctcctggcagcaggtcgactccacggattgctggattggttgacccttgatgccgccgag cttgctaacattgccggcttgggcgaacgcagtagcacccgcctgctcgccagcctggac agcgcccggcaacgccctttcgggcaatggctcaaggctctgggcttgccacccgtcggt gaagcccgactggatgggccgtggcaggcgctggccgagcgcaataccgaacaatggcaa gccgaagccggtatcggcccggaacgcgccgcgcagctgagggcattttttcgcgaccca caggtgttggcgctgagtgaagtattacgcactgccgggatcgacggcttttaa

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