Providencia heimbachae: NCTC12003_01947
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Entry
NCTC12003_01947 CDS
T05509
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
phei
Providencia heimbachae
Pathway
phei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12003_01947 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phei03400
]
NCTC12003_01947 (nth)
Enzymes [BR:
phei01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC12003_01947 (nth)
DNA repair and recombination proteins [BR:
phei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC12003_01947 (nth)
Prokaryotic type
NCTC12003_01947 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
SQH13227
LinkDB
All DBs
Position
1:complement(2180685..2181326)
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AA seq
213 aa
AA seq
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MNKSKRIEILTRLRDNDPHPTTELHFNSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PEKLMALGVDGIKAYIKTIGLFNTKAESVFKTCKILIEKHNSQVPENREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVVEVEDKLLKVVPAEFKVDCHHWFI
LHGRYTCIARKPRCGSCIIEDLCEFKDKIYPEN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcaaaacgtattgaaattctaactcgcctacgcgataacgatcctcatcca
acaacggagttgcactttaactccccttttgagctgcttattgcggtcttattgtcagca
caagcgacggatgtcagtgtcaataaagccaccgctaaattatatccagtggcaaataca
cccgaaaaattaatggctctcggcgttgacggcatcaaggcatacatcaaaaccattggg
ctatttaataccaaagcagaaagtgtttttaaaacctgtaaaattttaattgaaaaacat
aatagccaagtccccgaaaatcgtgaagcccttgaagctttacccggcgttgggcgtaaa
acagcaaacgtggtactcaatacggctttcggctggccaactatcgctgttgatacacat
atatttagagtctgtaatcgcactaatttcgcaccaggcaaaaatgtcgttgaagtcgaa
gataaattactcaaagttgtgcctgctgagtttaaagttgattgccatcactggtttata
ttgcatggtagatacacttgtatagcgcggaaaccgcgttgtggctcttgcattattgaa
gatttatgcgagttcaaagataaaatatatcctgaaaattaa
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