Providencia heimbachae: NCTC12003_02809
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Entry
NCTC12003_02809 CDS
T05509
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phei03009
]
NCTC12003_02809 (rlmC)
Enzymes [BR:
phei01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NCTC12003_02809 (rlmC)
Ribosome biogenesis [BR:
phei03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC12003_02809 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_15
Methyltransf_11
Cons_hypoth95
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
SQH14066
LinkDB
All DBs
Position
1:complement(3080745..3081884)
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AA seq
379 aa
AA seq
DB search
MNMDCKKYTAGECRSCQWIELSPEQQLSQKQNHLQALLPLVDQSTFEPPVSGEAERFRNK
AKMVVSGSVEKPVLGIVNRDGKAVDLTDCPLYPVEFATVFAELIPFIAKAGLTPYNIERK
RGELKYILLTQSWHSGQFMLRFVLRSEKKLEQLTNALPWLQAKLPELSVITANIQPTHMA
ILEGAQEIMLTTQHVLREEFNQVPLFIRPQSFFQTNPLVAAKLYQTAREWVNALKIISLW
DLFCGVGGFGLHCAQKQTKLTGIEISAPAIACARQSASELGLQHVEFQALDSTQFAVGHQ
DVPQLVLVNPPRRGIGKILCEYLSQMQPEYILYSSCNAQTMAQDLTLLSGYQVSKVQLFD
LFPHTAHYEVLTLLEKIQK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggattgtaaaaaatataccgctggggagtgtcgttcttgtcaatggatcgaa
ttatcgccagaacaacaactttcacaaaaacaaaatcatttgcaagcattgcttccttta
gtcgatcaatctacttttgaaccgcctgtctctggcgaagccgaacggtttcgtaataaa
gccaaaatggtcgtgagtgggagtgttgaaaaaccggtgctgggtattgttaatcgtgat
ggtaaagcggttgatttaacggattgtccgctatatcccgtcgagtttgctactgttttt
gcagaattaatcccgtttatcgctaaagcaggtttaacaccttataatattgaacgtaaa
cgtggagagctgaaatacattcttttgacccaaagctggcactctgggcaatttatgttg
cgttttgtcttacgctcagaaaaaaaacttgaacaattaaccaatgcattaccgtggtta
caagctaaattacctgaattatccgttatcaccgccaatattcagcccactcatatggcg
atacttgagggcgcgcaagaaatcatgctcaccacgcaacatgttttgcgcgaagagttt
aatcaagttccactatttatccgaccgcaaagtttttttcaaactaatcctctggttgca
gcgaaactctatcaaacggcaagagaatgggttaatgcgctgaaaattatcagcttatgg
gatttattttgtggagtcggtggattcggtcttcattgtgcacaaaagcaaaccaaatta
acggggattgaaattagtgcccccgcaattgcctgtgcccgtcaatcagcttctgaattg
ggtttacaacatgtggagtttcaagcactagattccactcaatttgcggtcggtcatcaa
gacgtaccccagttggtattagttaatccaccaagacgcggtatcggtaagatattatgc
gaatacttatcgcagatgcagccagaatatattctttattcaagctgtaatgcacaaact
atggctcaagacttaacattattgagtggttatcaagtctctaaagttcagttatttgat
ttgtttccgcatactgcacactatgaagtgttaactttattagaaaaaattcaaaaataa
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