Ectopseudomonas hydrolytica: NLY38_04180
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Entry
NLY38_04180 CDS
T08519
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf01501
beta-Lactam resistance
phf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLY38_04180
01503 Cationic antimicrobial peptide (CAMP) resistance
NLY38_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phf03036
]
NLY38_04180
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phf02000
]
NLY38_04180
01504 Antimicrobial resistance genes [BR:
phf01504
]
NLY38_04180
Chromosome and associated proteins [BR:
phf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NLY38_04180
Transporters [BR:
phf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NLY38_04180
Antimicrobial resistance genes [BR:
phf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NLY38_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
BSH_CzcB
BSH_CusB
HH_EMRA
Beta-barrel_RND_2
HH_YBHG
CzcB_C
HH_AAEA_pHBA
BSH_YhbJ
CC2D1A-B_DM14
Motif
Other DBs
NCBI-ProteinID:
UTH32524
LinkDB
All DBs
Position
916039..917190
Genome browser
AA seq
383 aa
AA seq
DB search
MPLVRLLRCCLPFNLALLSSVALAADAPPAAVTVERVVAGELPIVLEYPARTTGYREVQV
RAQVGGILQERTYQEGSRVQKDQVLFRIDPRPYEAALARAKGALAQEQARFRQTDRDLKR
IRELQKKGFASESELDNAVSNFEQSKANIEAAQAEVQSRQIDLDYTTVKAPITGITSKES
VSEGSLIVAGDPSASLLTQITQLDPIFVNFAYPDAEAERLRRELSEGSLVPPASGKLSVE
VHFGDGSAYPVPGEVDFTDSLIDRGTGTVSARGVVPNPDQKLLPGQFVRVKVKGLTRPQA
ITVPERAVAQGPRGTFVYVVDDQGIARMRQVATGDTSGGRWLLLSGVSDGERVIVDGLAK
VRPDSPVQVEEAKAATAQTPAQE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgttcgtctgctgcgttgctgcctgcccttcaatctagctctgttgtcgtcg
gttgcactggctgccgatgcgccgccagccgcggtgacggtggagcgcgtggtggccggc
gaattgccgatcgtgctggagtacccggcccgcaccacgggctatcgcgaggtgcaggta
cgcgcgcaggtcggcggcatcctgcaggaacgcacttatcaggaaggcagccgggtgcag
aaggatcaggtgctgtttcgcatcgacccgcgcccctacgaggccgccctggctcgtgcc
aagggcgcgctggcgcaggaacaggcgcgtttccggcagaccgaccgcgacctcaagcgc
atccgtgaactgcagaagaagggcttcgccagcgagagcgagctggacaatgcggtgtcc
aacttcgagcagagcaaggccaatatcgaggcggcccaggccgaggtgcagtcgcgccag
atcgacctcgactacaccacggtgaaggcgccgatcaccggcatcaccagcaaggagagc
gtctccgaaggcagcctgatcgtcgctggcgaccccagtgccagcctgcttacgcagatc
acccagctcgacccgatcttcgtcaatttcgcctatccggatgccgaggccgaacgcctg
cggcgtgagttgtccgagggcagcctggtgccgccggcaagcggcaagctcagtgtggag
gtgcacttcggcgacggttcggcctatccggtgcccggcgaggtggacttcaccgacagc
ctgatcgatcgcggtacgggcaccgtcagtgcccgcggcgtggtgcccaaccccgatcag
aagctgctgccggggcagttcgtgcgcgtcaaggtcaaggggctgacgcgcccgcaggcc
atcaccgtgcccgagcgggccgtggctcaggggccgcgcggcaccttcgtctacgtcgtc
gacgatcagggcatcgcgcgcatgcgccaggtcgccacgggcgatacatcgggcggacgc
tggctgcttctgtccggggtcagcgatggtgagcgggtgattgtcgatggcctggccaag
gtgcgtccggacagcccggtgcaggtcgaggaggcgaaggcggccacggcccagaccccg
gctcaggagtaa
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