Ectopseudomonas hydrolytica: NLY38_06065
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Entry
NLY38_06065 CDS
T08519
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf01501
beta-Lactam resistance
phf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLY38_06065
01503 Cationic antimicrobial peptide (CAMP) resistance
NLY38_06065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phf03036
]
NLY38_06065
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phf02000
]
NLY38_06065
01504 Antimicrobial resistance genes [BR:
phf01504
]
NLY38_06065
Chromosome and associated proteins [BR:
phf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NLY38_06065
Transporters [BR:
phf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NLY38_06065
Antimicrobial resistance genes [BR:
phf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NLY38_06065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
HH_MFP_RND
BSH_CzcB
RND-MFP_C
YknX_C
CzcB_C
Biotin_lipoyl
BSH_CusB
CSD2
Beta-barrel_YknX
HH_EMRA
BSH_LcnD
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
UTH32873
LinkDB
All DBs
Position
complement(1310662..1311807)
Genome browser
AA seq
381 aa
AA seq
DB search
MLLRRMLIMLGVVLVVVLALAAYKGFSIYQQIQMFSAPQPAISVSAALAEEQPWQGRLPA
IGTLKAFQGVDLAAEVDGIVSAVLFESGQKVTLGQPLIQLDSEVERANLATAEAVRSLAR
VEFERGRSLVSRQNISKSEFDRLNAELLKAEATVSQLKAQLDKKRVLAPFAGTIGIRQVD
TGDYLSPGAAIATLQDLSRLHVDFFLPEQRAPQLQVGQRVLVGVAAYPGETFEGQIAAIN
PKVENETRNLQVRATLSNPDEKLLPGMFANLEVLLPGDEAKIVVPETAITYTLYGNSVYV
IDEKRGEDGQPVKDEGGKTQLTVERRFVETGERRAGRVVIVKGLQAGEQVVTSGQLKLDN
GAHVEVVEDPALAIQAAATTQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttgctccgccgcatgctcatcatgctcggcgtcgtactcgtcgtggtactcgccctc
gccgcctacaaaggcttttccatctatcagcagatccagatgttctcggcgccgcagccg
gccatcagcgtctctgccgccctggccgaagagcagccctggcagggccgcctgccagcc
atcggcacgctcaaggcgttccagggcgtggacctggccgccgaagtggacggcatcgtc
agtgcggtgctgttcgagtccgggcagaaggtcacgctcggccagccgctgatccagctc
gacagcgaagtggaacgcgccaacctggccaccgccgaggcggtgcgcagcctggcgcgg
gtcgagttcgagcgcgggcgcagcctggtgagccggcagaacatctccaagagcgagttc
gaccgcctcaacgccgagctgctcaaggccgaggccacggtctcccagctcaaggcgcag
ttggacaagaagcgcgtgctcgcgcccttcgccggtaccatcggcatccgccaggtggac
accggcgactacctctcgccgggcgccgccatcgccaccctgcaggatctgtcgcgcctg
cacgtcgacttcttcctgcccgagcagcgcgcaccgcagctgcaggtgggtcagcgcgtg
ctggtgggcgtggcggcctatccgggcgagaccttcgaagggcagatcgccgcgatcaac
cccaaggtggagaacgagacccgcaacctgcaggtgcgcgccaccctgagcaacccggac
gagaagctgctgccgggcatgttcgccaacctcgaggtgctgctgccgggcgatgaggca
aagatcgtagtgccggaaacggccatcacctacaccctctatggcaactcggtgtacgtc
atcgacgagaagcgcggcgaggatggccagccggtcaaggacgaaggcggcaagacgcag
ctgacggtcgagcggcgcttcgtcgagaccggcgaacggcgtgccgggcgcgtggtgatc
gtcaagggcctgcaggccggcgagcaggtcgttacctccggccagctcaagctggacaac
ggcgcccacgtcgaggtggtcgaggatccggcgctggcgatccaggctgccgccaccacg
cagtaa
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