Ectopseudomonas hydrolytica: NLY38_18150
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Entry
NLY38_18150 CDS
T08519
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NLY38_18150 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phf03400
]
NLY38_18150 (nth)
Enzymes [BR:
phf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NLY38_18150 (nth)
DNA repair and recombination proteins [BR:
phf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NLY38_18150 (nth)
Prokaryotic type
NLY38_18150 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_5
RecR_HhH
HHH_8
DUF2400
Motif
Other DBs
NCBI-ProteinID:
UTH30347
LinkDB
All DBs
Position
3874501..3875139
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPEPKTELAYSTPFELLVAVTLSAQATDVSVNKATAKLFPVANT
PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRILIEKHGSQVPDNREDLEALPGVGRK
TANVVLNTAFRQLAMAVDTHIFRVSNRTGIAPGKNVVEVEKKLLKFVPKDYLLDAHHWLI
LHGRYVCTARKPRCGACRIEDLCEYKAKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccaaacgcctggaaatcttccgccgcctgcacgaggacaaccccgagccg
aagaccgagctggcctacagcacgccgttcgagctgctggtagcggtgacgctatcggcc
caggccaccgacgtcagcgtcaacaaggccacggccaagctgttcccggtggccaatacg
ccggaggccatctacgccctgggcgtcgagggactttccgagtacatcaagaccatcggc
ctgtacaacagcaaggcgaagaacgtcatcgaggcctgccgcatcctcatcgaaaaacat
ggcagccaggtgccggacaaccgcgaggacctcgaagccctgcccggcgtcggccgcaag
actgccaacgtggtgctcaataccgcgtttcgccagctggccatggccgtggacacgcac
atcttccgcgtcagcaaccgcaccggcatcgcgccgggcaagaacgtggtcgaggtggag
aagaagctgctcaagttcgtgcccaaggattacctgctcgacgcccaccactggctgatc
ctgcacggacgctacgtctgcaccgcacgcaaaccccgctgtggcgcctgccgcatcgag
gatctgtgcgagtacaaggccaagacttccgacgattga
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