Ectopseudomonas hydrolytica: NLY38_21045
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Entry
NLY38_21045 CDS
T08519
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf01501
beta-Lactam resistance
phf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLY38_21045
01503 Cationic antimicrobial peptide (CAMP) resistance
NLY38_21045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phf02000
]
NLY38_21045
01504 Antimicrobial resistance genes [BR:
phf01504
]
NLY38_21045
Transporters [BR:
phf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NLY38_21045
Antimicrobial resistance genes [BR:
phf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NLY38_21045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UTH30903
LinkDB
All DBs
Position
4481951..4485094
Genome browser
AA seq
1047 aa
AA seq
DB search
MSRFFIDRPIFAWVIALVIMLAGGLSILKLPINQYPSIAPPAVAIQVSYPGASAQTVQDT
VVQVIEQQLNGLDGLRYVSSSSNSDGSMEIIVTFEQGVNPDIAQVQVQNKLQLATPLLPQ
EVQQQGIRVTKSVRNFLMVIGVVSKDGSMTREDLSDYIVSNLQDPISRTKGVGDFQVFGA
QYAMRIWLDPAKLNAFQLTPVDVRSAIQAQNVQISSGQFGGLPAAPGNQLNATIIGKTRL
QSPEEFRKILLKVQADGSQVRLDDVAKVELGGENYAINAQFNGLPASGLAIRLATGANAL
DTAKAVRETIATLEPFFPAGMEVVFPYDTTPVISASIEGVVHTLFEAIVLVFLVMFLFLQ
NLRATIIPTMAVPVVLLGTFGVLAAFGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
REDGLSPKEATRKSMGQIQGALIGIALVLSAVFLPMAFFGGSTGVIYRQFSITIVSAMAL
SVLVALIFTPALCATLLKPIDGEHHEAKRGFFGWFNRTFDRTSNAYQRGVAGMLKRKAPY
LLLYLAIVAVMAFMFSRIPTAFLPEEDQGVLFAQVQTPSGSSAERTQVVVDEMRQYLLEE
EASTVKSVFTVTGFNFAGRGQSSGMAFIMLKPWGERPGEENGVAALAQRAQRHFFSFRDA
MVFAFAPPAVMEMGNATGFNFFLQDQAGVGHQVMNEARDKFLQLANQHPVLDSVRANGLR
DEAQYQLLIDDERARALGLSLADINSTLSIAWGASYVNDFIDRGRVKKVYLQGVSDARMS
PEDLNKWYVRNDQGRMVPFSAFASGEWTYGAPKLARYNGVSAVEILGAPAAGYSTGDAMA
AVEEIASQLPQGVGYSWTGLSYEERLAGSQTTALFVISAIVVFLCLAALYESWSIPFSVM
LVVPLGIIGALLFTELRGLSNDVFFKVGLLTTIGLSARNAILIVEFAKAQYEQGMGLAEA
AIEACRMRLRPIVMTSLAFILGCLPLAIASGAGAGSKHAIGTGVIGGMLSALVLAIFWIP
LFYVVVCSLFEKKRSEQAVENEKEVLQ
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtccagattctttatcgaccggccgatcttcgcctgggtgatcgccctggtgatcatg
ctggccggcggcctgtccatcctcaagctgccgatcaaccagtacccgagcatcgcgcca
cccgccgttgccatccaggtcagctacccgggcgcctcggcgcagacggtgcaggacacc
gtggtgcaggtgatcgaacagcagctcaacggcctcgatggcctgcgctatgtcagctcg
tcgagcaactccgacggcagcatggaaatcatcgtgaccttcgagcagggggttaacccg
gatatcgcccaggtccaggtgcagaacaagctgcagctggccactccgctgctgccgcaa
gaagtgcagcagcagggcatccgcgtgaccaagtcggtgcgcaacttcctcatggtcatc
ggcgtggtgtcgaaagacggcagcatgacccgtgaggacctgtcggactacatcgtctcc
aacctgcaggacccgatctcgcggaccaagggtgtcggcgacttccaggtgttcggcgcg
cagtacgccatgcgcatctggctcgacccggccaagctcaatgccttccagctgacgccg
gtggacgtgcgcagcgccatccaggcgcagaacgtgcagatctcctccggccagttcggc
ggcctgccggccgcgccgggcaaccagctcaacgccaccatcatcggcaagacccgcctg
cagagcccggaagaattccgcaagatcctgctcaaggtgcaggccgacggttcccaggtg
cgcctggacgacgtggccaaggtggagctgggtggcgagaactacgccatcaacgcgcag
ttcaacggcctgcccgcctcgggcctggcgattcgcctggccaccggcgccaacgccctg
gacaccgccaaggcggtgcgcgaaaccatcgccaccctggagccgttcttcccggcgggt
atggaagtggtcttcccctacgacaccacgccggtgatctcggcctccatcgaaggggtg
gtgcacaccctgttcgaagccatcgtgctggtgttcctggtgatgttcctgttcctgcag
aacctgcgcgccaccatcatcccgaccatggcggtgccggtggtgctgctcggcaccttc
ggcgtgctcgccgcgttcggcttctccatcaataccctgaccatgttcgccatggtcctg
gccatcggcctgctggtggacgacgccatcgtggtggtggagaacgtcgagcgggtgatg
cgcgaggacggcctgtcgcccaaggaagcgacgcgcaagtccatgggccagatccagggc
gcgctgatcggcatcgccctggtgctgtcggcggtgttcctgccgatggccttcttcggc
ggctccaccggggtgatctaccggcagttctccatcaccatcgtctcggccatggccctg
tcggtgctggtggcgctgatcttcaccccggcgctgtgcgccaccctgctcaagcccatc
gacggcgagcatcacgaagccaagcgcggcttcttcggctggttcaaccgcacgttcgac
cgcaccagcaatgcctaccagcgcggtgtggccggcatgctcaagcgcaaggcgccgtac
ctgctgctgtacctcgccatcgtcgcggtgatggcctttatgttcagccgcatccccacc
gccttcctccccgaggaagaccagggcgtgctgttcgcccaggtgcagacgccgtccggc
tccagtgccgagcgtacccaggtggtggtcgacgagatgcgccagtacctgctggaagaa
gaagcgagcacggtcaagtcggtgttcaccgtcaccggcttcaacttcgccggccgcggc
cagagctccggcatggccttcatcatgctcaagccctggggcgaacgtccgggtgaggag
aatggcgtggcggcgctggcgcaacgtgcgcagcgacatttcttcagcttccgcgatgcc
atggtgttcgccttcgccccgccggcggtgatggagatgggtaacgccaccggcttcaac
ttcttcctgcaggaccaggccggcgtcggccatcaggtgatgaacgaggcacgcgacaag
ttcctgcagctggccaatcagcacccggtgctcgacagcgtgcgcgccaacggtctgcgc
gacgaggcgcagtaccagctgctgatcgacgacgagcgcgcccgcgccctcggcctgtcg
ctggcggacatcaacagcaccctgtcgatcgcctggggcgccagctacgtcaacgacttc
atcgaccgcggccgggtgaagaaggtctacctgcaaggcgtctccgacgcgcgcatgagc
ccggaagacctgaacaagtggtacgtgcgcaacgaccagggccgcatggtgccgttcagc
gccttcgccagcggcgagtggacctacggcgcgcccaagctggcgcgttacaacggcgtc
tcggcggtggaaatcctcggtgcgccggcggccggctacagcaccggtgatgccatggcc
gcggtggaggaaatcgcctcgcagctgccgcagggcgtcggctactcctggaccggtctg
tcctacgaggagcgcctggccggttcgcagaccactgcactgttcgtgatctccgccatc
gtggtgttcctctgcctggcagcgctgtacgagagctggtcgatcccgttctcggtgatg
ctggtggtgccgctggggatcatcggtgcgctgctgttcaccgaactgcgcgggctgtcc
aacgacgtgttcttcaaggtcggcctgctcaccaccatcggtctgtcggcgcgtaacgcg
atccttatcgtcgagttcgccaaggcgcagtacgagcagggcatgggcctggccgaagcc
gccatcgaggcctgccgcatgcgtctgcgccccatcgtgatgacctcgctggcgttcatc
ctcggctgtctgccgctggccatcgccagtggcgccggcgccggcagcaagcacgccatc
ggcaccggggtgatcggcggcatgctcagcgccctggtgctggcgatcttctggattccg
ctgttctacgtggtggtctgctcgctgttcgagaagaagagaagcgagcaggccgttgaa
aacgagaaggaggtactgcaatga
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