Pseudonocardia sp. HH130630-07: AFB00_00745
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Entry
AFB00_00745 CDS
T04486
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh00300
Lysine biosynthesis
phh00550
Peptidoglycan biosynthesis
phh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AFB00_00745
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFB00_00745
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phh01011
]
AFB00_00745
Enzymes [BR:
phh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AFB00_00745
Peptidoglycan biosynthesis and degradation proteins [BR:
phh01011
]
Precursor biosynthesis
Amino acid ligase
AFB00_00745
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ANY09678
UniProt:
A0A1B1ZVD6
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Position
complement(160657..162267)
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AA seq
536 aa
AA seq
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MTRDRLPDRPEAVRPVDIALLGRFSGALLNPRTAGAGPGPLLDAATGGHTVTGVTLRAGS
VRPGDLFAAVPGARVHGADFAAQAIAGGAAAVLTDPDGADRPEVRHSRLPVLVHPDPREV
LGPVSAAVYGEPTARLRVLGVTGTSGKTTVGHLIEAGLAAAGRATGLLGTVRTRVRVPGA
EPRALASAFTTPEAPDLQALFAVMVEAGVTDVAMEVSSHALAMGRVGGSRFAVGAFTNLS
QDHLDFHPTMTDYFEAKARLFGGGGRGVEAARHGVVCVDDEWGRRLAARHPDAVTVSADP
SASGSRATWTVRELTAHPDGTQTFTAVGPGGLAQAVTLALPGRYNVANALVALACLDADG
IGPETAAAGFARLSVPGRMQRVDAGQPWLGVVDYAHKPAAVAALLDALRAQVEPHARIIT
VLGCGGDRDTGKRPLMGAAAAVRSDLLVVTDDNPRGEEPGAIRRAVLDGALQEPARGDVV
EVGDRRSAIVHAVRSARPGDAVVIAGKGHETGQEVHGVKYPFDDADELDTAIRAIS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgaccggctccccgatcgaccggaggcggtccgtccggtcgacatcgccctg
ctcgggcgcttctccggtgccctgttgaacccacgcacggccggtgccggccccggtccg
ctgctcgacgccgcgaccggcgggcacaccgtgaccggtgtcaccctgcgggccggttcg
gtccggccgggtgatctcttcgcggccgtcccgggtgcccgcgtgcacggggccgacttc
gccgcgcaggcgatcgcggggggcgccgcggccgtcctcaccgacccggacggcgccgac
cgccccgaggtccggcactcccggctcccggtgctggtgcacccggacccgcgcgaggtg
ctgggcccggtgtcggcggcggtctacggcgagccgaccgcccggctgcgggtgctgggc
gtcaccggcacctccgggaagacgaccgtcggccacctcatcgaggcggggctggccgcc
gccgggcgggccaccggtctgctcggcacggtgcggacccgggtgcgggtccccggcgcc
gagccgcgggcgctggcgagcgccttcaccaccccggaggcccccgacctgcaggcgctg
ttcgcggtgatggtcgaggccggcgtcaccgacgtcgcgatggaggtgtccagccacgcg
ctcgcgatgggccgcgtcggcgggtcgcggttcgcggtgggcgccttcaccaacctgtcc
caggaccatctggacttccacccgacgatgaccgactacttcgaggcgaaggcccggttg
ttcggcggtggcgggcgcggtgtcgaggccgcccggcacggcgtcgtctgcgtcgacgac
gagtggggccgccggctcgccgcccggcacccggacgcggtcacggtcagcgccgacccg
tcggcgtcgggctcccgggccacctggacggtccgcgagctcaccgcccacccggacggc
acccagaccttcaccgcggtcggccccggtggcctggcccaggcggtcacgctggccctg
cccggccggtacaacgtcgcgaacgcgctcgtcgcgctggcctgcctggacgccgacggc
atcggcccggagaccgcggcggccgggttcgcccggctgtccgtgccgggccggatgcag
cgcgtcgacgccgggcagccgtggctcggcgtcgtcgactacgcgcacaagccggccgcc
gtcgccgcgttgctggacgcgttgcgcgcccaggtcgagccgcacgcccggatcatcacc
gtgctgggctgcggcggggaccgggacaccggcaagcgcccgctgatgggcgccgccgcc
gcggtccggtccgacctgctcgtcgtgaccgacgacaacccgcgcggcgaggagccggga
gcgatccggcgcgccgtgctcgacggggcgctgcaggagccggccaggggggacgtggtc
gaggtcggcgaccgccgtagtgcgatcgtgcacgcggtgcgctcggcccgccccggtgac
gccgtcgtgatcgcgggcaagggccacgagaccggccaggaggtacacggcgtcaagtac
ccgttcgacgacgcggacgagctggacacggcgatccgggcgatctcatga
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