Pseudonocardia sp. HH130630-07: AFB00_04275 Help Entry AFB00_04275       CDS       T04486                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism phh  Pseudonocardia sp. HH130630-07 Pathway phh03030   DNA replication phh03410   Base excision repair phh03420   Nucleotide excision repair phh03430   Mismatch repair Brite KEGG Orthology (KO) [BR:phh00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AFB00_04275    03410 Base excision repair     AFB00_04275    03420 Nucleotide excision repair     AFB00_04275    03430 Mismatch repair     AFB00_04275  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:phh03032]     AFB00_04275    03400 DNA repair and recombination proteins [BR:phh03400]     AFB00_04275 Enzymes [BR:phh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AFB00_04275 DNA replication proteins [BR:phh03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AFB00_04275 DNA repair and recombination proteins [BR:phh03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AFB00_04275    NER (nucleotide excision repair)     GGR (global genome repair) factors      AFB00_04275    MMR (mismatch excision repair)     DNA ligase      AFB00_04275   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AFB00_04275 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH_5 Auto_anti-p27 BRCT_2 Motif Other DBs NCBI-ProteinID:  ANY05647 UniProt:  A0A1B1ZIR7 LinkDB All DBs Position complement(869317..871755) Genome browser AA seq 812 aa AA seqDB search MSGDPANLPVVSSPTDEQARERHAQLATEVADHQFRYYVLDAPVVSDGQFDELWHELLAL EEAHPELVTPDSPTQKVGGTFSTVFTAHDHLERMLSLDNAFSPDDLRTWQERVTREVGEN LHYLCELKIDGLAVNLLYEDGTLTRALTRGDGRTGEDITLNMRTLGEVPVTLTGTAEFPV PRLVEVRGEVYFRLADFDRLNASLVEAGKEPFANPRNTAAGSLRQKDPRVTASRNLRLIC HGIGKREGFTPVTQSQAYDALVAWGLPISPRTKVLRGIDRVIEYVEHWGEHRHDVEHEID GVVVKVDEVGLQRRLGATSRFPRWAIAYKYPPEQAATRLLDIRVNVGRTGRVTPYAVMEP VKVAGSTVEMATLHNADEVRRKGVLIGDRVVIRKAGDVIPEVLGPVADVRDGSEREFVMP THCPECGTALARQKAGDVDRRCPNARSCPAQLRERLFHVAGRGSFDIEGLGYEAAVALLT SGVLTDEGDVFALTADDLLRTELFRNQKGELTVNGGKLLIHLDAAKDRPLWRVLVGLSIR HVGPTAAQALAREFGSMEALELAAAAAKEGTEAAGVEIVSDGSAGDEPVAAGVTDASPAA AGTAATETAAGGTAVDGASGGTAVDAATGDTAVDGGAGDTSAAEASGDAEAAVAEAEKQE RAAVRARAKAVAEALAPIAGVDGVGPTIAAAVRDWFSVDWHREVVDRWRASGVRMADEQD DSVPRFLEGLSIVITGSMENWSRDEAKEAIMARGGRAAGSVSKKTAFLVAGEAPGSKFDK ATELGVPVLDEAGFEILLGRGPEAATEHAAAE NT seq 2439 nt NT seq  +upstreamnt  +downstreamnt ctgtcgggggacccggctaacctccccgtcgtgagttccccgaccgacgagcaggcccgc gagcggcacgcgcagctggccaccgaggtggccgaccaccagttccggtactacgtgctg gacgcgccggtcgtctccgacggccagttcgacgagctctggcacgagctgctcgcgctg gaggaggcgcacccggagctggtcacgccggactcgcccacccagaaggtcggcggcacg ttctccaccgtcttcaccgcgcacgaccacctggagcggatgctctcgctggacaacgcg ttctccccggacgacctgcgcacctggcaggagcgggtgaccagggaggtgggggagaac ctgcactacctgtgcgagctcaagatcgacgggctggcggtcaacctgctctacgaggac ggcaccctcacccgcgcgctgaccaggggcgacgggcgcaccggcgaggacatcacgctg aacatgcgcaccctcggcgaggtcccggtcacgctcaccggcaccgcggagttcccggtg ccgcggctggtcgaggtccgcggcgaggtctacttccggctggcggacttcgaccggctc aacgcgtcgctggtcgaggccggcaaggagccgttcgcgaacccgcgcaacaccgcggcc gggtcgctgcgccagaaggacccgcgggtcaccgcgtcgcggaacctccggctgatctgc cacggcatcgggaagcgggagggcttcaccccggtcacccagtcccaggcctacgacgcg ctggtcgcgtggggcctgccgatctcgccgcgcacgaaggtgctgcgggggatcgaccgg gtgatcgagtacgtcgagcactggggggagcaccgccacgacgtcgagcacgagatcgac ggcgtcgtggtcaaggtcgacgaggtcggcctgcagcgcaggctcggcgccacgtcccgg ttcccgcgctgggcgatcgcctacaagtatcccccggagcaggcggccacgaggctgctc gacatccgggtcaacgtcgggcgcaccggccgggtgaccccgtacgccgtcatggagccg gtcaaggtcgccggctccaccgtggagatggcgaccctgcacaacgccgacgaggtccgc cgcaagggcgtgctcatcggtgaccgggtggtgatccgcaaggcgggtgacgtgatcccg gaggtgctgggcccggtggccgacgtccgggacggcagcgagcgcgagttcgtgatgccc acgcactgcccggagtgcggcaccgcgctggcccggcagaaggcgggcgacgtcgaccgg cgctgcccgaacgcccgctcctgcccggcgcagctgcgcgagcggctgttccacgtggcg ggccgcggttccttcgacatcgagggtctcggctacgaggccgcggtggcgttgctgacc tcgggcgtgctgaccgacgagggcgacgtcttcgccctgaccgccgacgacctgctgcgg accgagctgttccgcaaccagaagggcgagctgacggtcaacggcggcaagctcctcatc cacctggacgcggcgaaggaccggccgctgtggcgggtgctggtcgggttgtcgatccgg cacgtgggcccgaccgcggcacaggcgctggcgcgggagttcgggtcgatggaggccctc gaactcgccgcggccgcggcgaaggagggcaccgaggcggccggcgtggagatcgtctcc gacggctccgcgggcgacgagcccgtggcggccggcgtgacggacgcatccccggcggcc gccggcaccgccgcgacggagaccgcggccggcggcaccgccgtggacggggcgagcggc ggcacagccgtggacgcggcgaccggcgacaccgccgtcgacgggggcgcgggcgacacc tcggccgcggaggcgagcggtgacgccgaggccgccgtcgccgaggccgagaagcaggag cgagccgcggtgcgtgcccgggcgaaggccgtcgccgaggcactcgccccgatcgccggg gtggacggtgtcggccccaccatcgcggcggcggtccgggactggttctcggtggactgg caccgtgaggtcgtggaccgctggcgcgcgtccggcgtccggatggccgacgagcaggac gactcggtcccgcgcttcctcgaggggctgtcgatcgtgatcaccggctcgatggagaac tggtcccgggacgaggccaaggaggccatcatggcccgcggcgggcgggccgccggctcg gtgtcgaagaagacggcgttcctggtggccggcgaggccccgggctcgaagttcgacaag gcgaccgagctgggcgtcccggtgctcgacgaggccgggttcgagatcctcctgggccgg ggccccgaggcggcgacggagcacgccgccgcggagtga

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