Pseudonocardia sp. HH130630-07: AFB00_26235
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Entry
AFB00_26235 CDS
T04486
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh00270
Cysteine and methionine metabolism
phh00450
Selenocompound metabolism
phh00670
One carbon pool by folate
phh01100
Metabolic pathways
phh01110
Biosynthesis of secondary metabolites
phh01230
Biosynthesis of amino acids
phh04980
Cobalamin transport and metabolism
phh04981
Folate transport and metabolism
Module
phh_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AFB00_26235 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AFB00_26235 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AFB00_26235 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AFB00_26235 (metH)
04980 Cobalamin transport and metabolism
AFB00_26235 (metH)
Enzymes [BR:
phh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
AFB00_26235 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
ANY10419
UniProt:
A0A1B1ZXB8
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All DBs
Position
complement(5515422..5519096)
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AA seq
1224 aa
AA seq
DB search
MSTRTVDPERVRQAERKTEQLRELLGTRIGVIDGAWGTVIQGMGLTPEDYRADWLTDHPK
DTTGDPDLLNLTRPDLILDSHRRYFTAGADLTTTNTFTATTIGQADYALEDHVVAMNVEA
AKLARRAADEAEAETGEPKWVAGSIGPLNVTLSLSPKVEDPAYRAVTYQQVYDSYAEQVA
ALDEGGVDVLLIETIFDTLNSKAALHAAHDVAPHLPVWISVTIVDRSGRTLSGQTVDAFW
TSIRHAEPLVVGLNCALGADEMRPHAAALAEISDTFVATYPNAGLPNAFGGYDETPEQTA
ALLQEFAESGLVNIVGGCCGTGHDHIARISEAVRGLPPRTPAEPSHRTRFSGLERFEIGP
DTGFVMIGERTNVTGSKRFRRLIESKDYTGALDVALDMVRGGANMLDVNMDADLLESADE
MTTFLNLLATEPEIARLPIMIDSSRWPVIEAGLRCVQGKGVVNSISLKEGEEPFLAQAAV
VRSYGAGVVVMAFDETGQADTADRKVEICGRAYDLLVQRAGLAPEDIIFDPNILAVATGM
EEHNNYAKDFIDACPRIKERCPGAHISGGVSNLSFAFRGNNVVREAMDSAFLFHAIRAGL
DMGIVNAGQLAVYQDIPADLLEMCEDILFNRRPDATDRLVDAAERFKGEGTQRKVDLSWR
ENDVRQRISHALVHGIVDFVEADTEEARAEAARPLDVIEGPLMDGMKIVGDLFGDGKMFL
PQVVKSARVMKRAVAYLEPFMEKEKEEAKARGEIQSERGNGKVVMATVKGDVHDIGKNIV
GVVLGCNSYEVVDLGVMVPAQTILDTAVAENADVIGLSGLITPSLDEMVGVAAEMERRGL
KLPLLIGGATTSRQHTAVKVAPAYDGTVLHVLDASRVVGVVSDLLDDDRAEALAKRNAED
QDRLREQHANREAKPLLPIADAVANHERITFGELPVPEFTGIRECAPSIAELRELIDWQF
LFLAWELKGKFPGILNSPVAKELYDDANAMLDEIIANDRFTARGVYGFWPAHAEGEDIVI
SPDSGDVRLPMLRQQTAKPEGRANRSLADYVAPDGDHLGAFAVSIHGAEEMAKEFEEALD
DYKAIMVKAVADRLAEAFAEYAHRKARREWFEPDADQPLEELLAERFRGIRPAFGYPACP
DHTLKRPLFDLLGAEETGVRLTESFAMMPAAAVSGMMFAHPDARYFTVGRIGPDQVSDYA
RRLGVDVAEVERWLRPNLGYTPDA
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atctccacgcgcacggtcgaccccgagcgggtccggcaggcggaacgcaagaccgagcag
ctcagggaactgctcggaacgcggatcggcgtcatcgacggcgcatggggcacggtcatc
caggggatgggcctgaccccggaggactaccgggcggactggctgacggaccacccgaag
gacaccaccggtgatccggacctgctgaacctcacccgtccggacctgatcctggacagc
caccggcgctacttcaccgcgggtgcggacctcacgaccacgaacaccttcaccgcgacg
acgatcgggcaggccgactacgccctcgaggaccacgtcgtggccatgaacgtcgaggcc
gcgaagctggcccgccgggccgccgacgaggcggaggctgagaccggcgagcccaagtgg
gtcgccgggtcgatcggcccgctcaacgtcacgctgtcgctgtcgccgaaggtcgaggac
ccggcctaccgtgccgtgacctaccagcaggtctacgactcctacgccgagcaggtcgcc
gcgctcgacgagggcggggtcgacgtcctgctgatcgagacgatcttcgacacgctgaac
tcgaaggccgcgctgcacgccgcgcacgacgtcgcgccgcacctgccggtgtggatctcg
gtcaccatcgtcgaccggtccggccgcaccctgtccgggcagaccgtggacgcgttctgg
acctcgatccggcacgccgagccgctggtcgtcgggctgaactgcgcactcggggcggac
gagatgcgcccgcacgccgcggcgctcgccgagatcagcgacacgttcgtcgcgacctac
ccgaacgccgggctgccgaacgcgttcggcggctacgacgagaccccggagcagaccgcg
gccctgctgcaggagttcgccgagtccggcctggtcaacatcgtcggcggctgctgcggg
accgggcacgaccacatcgcgcggatctccgaggcggtgaggggcctcccgccgcggaca
ccggccgagcccagtcaccggacccgtttctccgggctggagcggttcgagatcggcccg
gacaccggcttcgtgatgatcggggagcggaccaacgtcacggggtccaagcgcttccgc
cggctgatcgagtcgaaggactacaccggcgcgctggacgtcgcgctcgacatggtccgc
ggcggcgcgaacatgctcgacgtcaacatggacgccgacctgctcgagtccgccgacgag
atgacgacgttcctcaacctgttggccaccgagccggagatcgcccggctgccgatcatg
atcgacagctcgcggtggccggtgatcgaggccgggctgcgctgcgtgcagggcaagggc
gtcgtgaactcgatcagcctcaaggagggtgaggagcccttcctggcccaggccgccgtc
gtccggtcctacggtgcgggcgtcgtcgtgatggcgttcgacgagaccggccaggccgac
accgccgaccgcaaggtcgagatctgcggacgggcctacgacctgctcgtgcagcgcgcc
gggctggcacccgaggacatcatcttcgacccgaacatcctcgccgtcgcgaccggcatg
gaggagcacaacaactacgcgaaggacttcatcgacgcctgcccccggatcaaggagcgg
tgcccgggcgcgcacatctccggcggcgtctcgaacctgtcgttcgcgttccgcggcaac
aacgtcgtccgtgaggcgatggactcggcgttcctgttccacgccatcagggccggcctg
gacatgggcatcgtcaacgccggccagctcgccgtctaccaggacatcccggcggacctg
ctggagatgtgcgaggacatcctgttcaaccggcgcccggacgccaccgaccgtctggtc
gacgccgcggagcggttcaagggcgagggcacccagcgcaaggtggacctctcctggcgg
gagaacgacgtccgccagcggatctcgcacgcgctggtgcacgggatcgtcgacttcgtc
gaggccgacaccgaggaggcccgcgccgaggccgcgcggccgctcgacgtgatcgagggc
ccgctgatggacggcatgaagatcgtcggcgacctgttcggcgacgggaagatgttcctg
ccccaggtcgtcaagtcggcgcgggtgatgaagcgggccgtcgcctacctcgagcccttc
atggagaaggagaaggaggaggccaaggcccgcggcgagatccagtccgagcggggcaac
ggcaaggtcgtcatggcgacggtcaagggcgacgtgcacgacatcggcaagaacatcgtc
ggcgtcgtgctcggctgcaacagctacgaggtcgtcgacctcggcgtgatggtgcccgcg
cagaccatcctcgacaccgcggtcgcggagaacgccgacgtcatcggcctgtccgggctg
atcacgccgtcgctggacgagatggtcggcgtcgccgcggagatggagcgccgggggctc
aagctcccgctgctcatcggcggcgccacgacctcgcgccagcacaccgccgtgaaggtc
gcccccgcctacgacggcaccgtgctgcacgtcctggacgcgtcacgcgtcgtgggcgtg
gtgtccgacctgctcgacgacgaccgtgccgaggcgctggccaagcgcaacgccgaggac
caggaccggctgcgcgagcagcacgccaaccgcgaggccaagccgctgctgccgatcgcc
gacgcggtggccaaccacgagcggatcaccttcggtgagctgccggtcccggagttcacc
gggatccgggagtgtgccccgagcatcgccgagctgcgggagctcatcgactggcagttc
ctgttcctggcctgggagctgaagggcaagttccccgggatcctgaactcgccggtggcc
aaggagctctacgacgacgccaacgcgatgctcgacgagatcatcgcgaacgaccggttc
accgcacggggggtgtacgggttctggccggcgcacgccgagggcgaggacatcgtcatc
tccccggactcgggcgacgtccggctgccgatgttgcgccagcagacggccaagccggag
ggccgggccaaccggagcctggccgactacgtggcgcccgacggcgaccacctcggggcc
ttcgccgtctcgatccacggtgccgaggagatggcgaaggagttcgaggaggccctcgac
gactacaaggccatcatggtgaaggcggtcgcggaccggctggccgaggccttcgccgag
tacgcgcaccgcaaggcccgccgcgagtggttcgagcccgacgccgaccagccgctcgag
gagctgctggccgagcggttccgtgggatccgcccggcgttcggctacccggcctgcccc
gaccacaccctcaagcgcccgctgttcgacctgctcggcgccgaggagaccggggtgcgg
ctcaccgagtcgttcgcgatgatgccggccgcggcggtcagcgggatgatgttcgcccat
cccgacgcgcgctacttcaccgtcggccggatcggcccggaccaggtctccgactacgcc
cggcggctcggcgtcgacgtcgccgaggtcgagcggtggctgcggccgaacctggggtac
acccccgatgcctga
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