Pseudopodoces humilis (Tibetan ground-tit): 102099402
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Entry
102099402 CDS
T02921
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102099402 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102099402 (SMG6)
03032 DNA replication proteins [BR:
phi03032
]
102099402 (SMG6)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102099402 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
102099402 (SMG6)
DNA replication proteins [BR:
phi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
102099402 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
102099402
NCBI-ProteinID:
XP_005525845
LinkDB
All DBs
Position
Unknown
AA seq
1419 aa
AA seq
DB search
MADGLERVRVSAAELRDMVAAQARAAGGGRENMKEVKEPRHRKDNRRPDQEIYKPGLSRL
RSKLVSPKQEASEKERSRAEEDKEESAGDKDSVGVGAAAVEDWNKSDGPKQNGPSQEKEE
TETKGSLQSQENSSKQPVVDEWCPKTPRRTKKPDQQIYQPGKRLYSTAKEPSLLSPGEEI
TGRMEQLKVEGYEETEKGAGRESNRKIKLSKEDREGNQAGEAVKAARGDKGRRAERGDRV
RRTGDEVLPGKLGSTKRYSRTDKRRSRYRTCSTSSAGSNNSTDGALLVDGVERRQERARE
RVRPRKQLSVSSTDSLDDDRIDEAEVYVSSRNSDRRRHSEQSRTSRSENEWSSNGREVKG
PFRVKFVSRTMNRDVSLADTDKKKSLKDLEVSEARSQSREPQGRGRGILFLPANTDLSAS
SVGVPEATHPGPRLLLGGAGSKGPRSRGRGGTARRLWDPNNPDQKPALKSQTAQLHFLDT
DDEVSPTSWGEARQAQPSYYKFQNSDNPYYYPRASGQGPQYPYGGYSLQYPMGPTNGVYP
GAYYPGYPGQAGQYLCGPLSPTPLSPEMEQQMRNMQQQELSKLLREAGNQEQQLSNLLSR
DRISPEGLEKMAQLRVEMLQLYERCILMDIEFSDTQNVDQLLWKNAFYQVIEKFRQLLKD
PQGENAQEIRNKLLLLLDEGSSFFDGLLQKLQVSYQFKLEDYMDGMAIRSKPLRKMVKYA
LISAQRCMICLGDICRYREQANDTANYGKARSWYLKAQQIAPKNGRPYNQLALLAIYTRR
KLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKSEQMEQRKRQVLDVSPNRRGKGKKS
TLRQVGDDATRLEIWIHPSHPRSSQGHESGRDSEQDNGLGNLSPSDLNKRFILSFLHAHG
KLFTRIGMETFPAVAEEVLREFQVLLQHSPPPIGSTRMLQLVAINMFAVYNSQPKECISE
DCRSVIQEQATALGLSMFALLVRRCTSLLRECVPVQPQEMEPQEDEEDDIKVSALPQDLK
ELLPSVKVWSDWMLGHPDTWNPPPTSLELPKQVSVDVWATLADFCNILTTVNQSEVPLYK
DPDDDLALLSLEEDRLLSGFVPLLVAPQEPCYVERTSDKVIAADCKRVTVLKYFLEALCG
QEEPLLAFKGGKYVSVAPVPDAMGKEMGSQEGKQLEDQEDDVRIEAFEDDSETEGSGGEM
DIKELRAKKQALARKVAEQQRRQDKIQAVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLG
SLVTLLDCRKFILVVPLIVINELDGLAKGPEMEHRAAGYARQVQERARKSIEFLEERFES
RDNCLRALTSRGNELESISFRSEDTTGQQGNNDDLILSCCLHYCNDKAKDFMPSNKDDPI
RLLREVVLLTDDRNLRVKALTRNVPVRDIPTFLKWAQEG
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgggttggagcgcgtccgcgtctcggccgctgagctgcgggacatggtggcg
gcgcaggcccgcgcggccggcggcgggcgagaaaacatgaaggaggtgaaggagccgagg
catcgcaaagacaacaggcgcccagaccaggagatttacaagcccggcctctccagactg
aggagcaaacttgtgtcaccaaagcaagaggcctcagagaaggaaaggagcagagctgaa
gaggacaaggaggagagtgctggggacaaagactctgtgggagtgggagctgcagctgtg
gaggactggaacaaaagcgatggccccaagcagaatggtccttcgcaggaaaaggaagaa
acagagaccaaaggcagcctgcaaagccaggaaaactcatccaagcagcccgtcgtggat
gaatggtgtccaaaaacccccaggagaaccaagaaaccggaccagcagatctaccagcct
gggaaacgcctgtactccactgctaaagaaccctccctgctgtcacctggagaggaaatc
accgggaggatggagcagctgaaagtggagggatatgaagagaccgagaaaggcgctggt
agagaaagcaacaggaaaattaaattgagcaaggaggatagagaggggaaccaggcaggg
gaagcagtgaaagctgccaggggggataaagggagacgagcagagcgaggtgacagggtg
aggaggacgggggatgaggtgctgccggggaagctgggctccaccaagcgctattcccgc
acggacaagcggcggagccggtaccgcacctgcagcaccagctcagccgggagcaacaac
agcacggatggagccctgctcgtggatggggtggagaggaggcaggagcgtgccagggaa
agggtacgtcctaggaaacagctctctgtgtcctccactgactccttggacgacgacagg
atcgatgaggcagaggtgtacgtctccagcaggaattcggacaggagaaggcattcggag
cagagcagaacttccaggagtgagaacgaatggagtagcaatggcagggaagtcaaggga
ccctttcgagtcaaatttgtcagtaggaccatgaacagggatgtcagcctggcagataca
gataaaaaaaagtccctgaaagacttagaggtttcagaggcgaggagccagagcagggag
ccccaagggaggggccgtgggattctgttcctgcctgccaacacggacctctctgccagc
tcagtgggtgtccctgaagccactcaccctggccccaggctcctgctgggtggggctggc
agcaaaggcccccggagccggggccgaggtggcactgcccgccggctgtgggacccaaac
aacccggaccaaaaacctgccctcaagagccagactgctcagcttcacttcctagacacg
gatgacgaagtgagccccacctcctggggggaagcccgccaggcccagccctcctactat
aaattccaaaactctgacaacccctattattaccctcgtgcctctgggcaaggcccccag
tatccctatggtggatactccctgcagtatcctatgggtccaaccaatggggtgtaccca
ggagcctattaccccggctaccccggccaggcagggcagtacctgtgtggcccactctct
cccactcctctgagccccgagatggagcagcagatgaggaacatgcagcagcaggagctc
agcaaactcctgcgtgaggctggcaaccaggagcagcagctcagcaacctcctgtccaga
gaccgcatcagcccggaggggctggagaagatggcccagctgagggttgagatgctgcag
ctctatgaacgctgcatcctgatggatatcgagttctctgacacccagaacgtggaccag
ttgctgtggaaaaatgctttttatcaggtgattgagaaattccggcagctcctcaaggac
cctcagggggaaaatgcccaagaaattcggaacaaactgctcttgcttctggatgagggc
tcttctttttttgacggcctcctccagaagctgcaggtgtcctaccaattcaagcttgag
gactacatggatgggatggccatccgcagtaaacctctcaggaaaatggtgaagtacgcc
ctgatcagtgcccagaggtgcatgatctgcctgggggacatctgccgatacagggaacag
gcgaacgacacggcgaactacggcaaagcccgcagctggtacctgaaggctcagcaaatt
gctcccaaaaacggccgcccgtacaaccagctggcacttctggccatctacacgaggagg
aagctggatgctgtgtactactacatgcgcagcctggctgccagcaaccccatcctcact
gccaaggagagcctcatgagtctgtttgaggagacaaaacgcaagtctgagcagatggag
cagaggaaacgtcaggtgctggatgtgagccccaaccgccggggcaagggcaagaaatcc
accctgcgacaagtgggagatgatgccaccaggctggagatctggatccatccctcccac
ccccgctcctcccagggccacgagtccggccgggattccgagcaggacaacgggcttggg
aacctcagccccagcgacctgaacaaaaggttcatcctcagttttctccatgcccatggg
aagctgtttaccaggattgggatggagactttccctgcggtggctgaggaggtcctgagg
gagttccaggtgctgctgcagcacagcccccctcccatcggaagcacccgcatgctgcag
ctcgtggccatcaacatgtttgcagtgtacaactcccagcccaaagagtgcatctctgag
gattgccgctccgtcatccaggagcaggccacggccctggggctctccatgtttgcactc
ctggtgaggaggtgcaccagcctgctgagggaatgtgtgccagttcagccacaagagatg
gagccacaggaggatgaggaggacgacatcaaggtctctgccctgccccaggacctgaag
gagctgctccccagtgtgaaggtctggtcagactggatgcttggccacccggacacctgg
aatcctcctccaacgtctcttgagctccccaaacaggtctcagtagatgtgtgggcgacg
ctggctgacttctgtaacatactgaccacagtgaatcagtcggaggtgcccttgtacaag
gacccagatgacgaccttgccctgcttagcctggaagaggatcggctgctctcgggcttc
gttcccctgctggtcgccccccaggagccctgctacgtggagaggacctcggacaaggtt
attgcagccgactgcaagagggtcacagttctgaagtatttcctggaagccctttgtgga
caagaagagcctttgctggcattcaagggtggaaaatatgtgtcagtggcacccgtccca
gacgccatgggaaaggaaatgggaagccaagagggaaaacaactggaagatcaggaggat
gatgtgaggattgaggcctttgaagatgactctgagactgaaggcagcggaggagagatg
gacatcaaggagctcagagccaaaaagcaagctctggccaggaaagtcgctgagcagcag
cgccgtcaagacaagattcaggccgtgctgaaagaccagagccaaatgaggcagatggag
ctggagatcagacctgtctttctggtcccggacaccaatggtttcatcgatcacctgggc
agtttggtcacgctgctggactgcaggaagttcatcctggtggtgcccctcatcgtgata
aacgagctggatggcctggccaagggcccagagatggagcaccgggctgcaggctatgcc
cgccaagtgcaggagagagccaggaagtccatcgagttcctggaggagagatttgagagc
cgggacaactgtttgagggctctgaccagccgaggcaacgagctggagtccatctccttc
cgcagtgaagacaccactggccagcagggaaacaatgatgacctgattctgtcctgctgc
ctccactattgtaatgacaaggccaaggatttcatgccctccaacaaagacgatcccatc
cgtttgctcagggaagtggttttgctgacggacgaccggaacctgcgagtcaaagcgctg
acccgcaacgtgccggtgcgggacatccccaccttcctcaagtgggctcaggagggctga
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integrated database retrieval system
