KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102102077
Entry
102102077         CDS       T02921                                 
Symbol
AFF4
Name
(RefSeq) AF4/FMR2 family member 4
  KO
K15185  AF4/FMR2 family member 4
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:phi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102102077 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phi03021]
    102102077 (AFF4)
Transcription machinery [BR:phi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     102102077 (AFF4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 102102077
NCBI-ProteinID: XP_005523755
LinkDB
Position
Unknown
AA seq 1162 aa
MNREDRNVLRMKERERRNQEIQQGDEAFPPNSPLFAEPYKVTSKEDKLSSRIQSMLGNYD
EMTDLIGDRPLQKIVAIPKPSVPAAPDDKPTPGFFGEQRHGAGSHQSSKWTPVGPAPSTS
AQSQKRSAGLGGHGQRSGGGAAGAGARHERDSYGGGRKKGQHGSEHSKGRSGSPGKPPAV
SSLASGHSRAHGGDHHGKDHQRSKSPRDPEPSWDSPSRVPSFASGQHSNQSFPPSLMSKS
SSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQTHGGGVNELKPSSKAHLTKLKIPSQPLD
ASASGEVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGTGEQKRYN
PSSKTSNGHQSKSCESNQTDMLKDDLKLSSSEDSDGEQDCDKTVPRSTPGSNSEPSQHNS
EGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWL
NKVNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYTDQGGSKDSISSTPGRDSKPTQK
GSESSRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEEPRGGLKIESETPVDMATNIPS
NRHKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDSDENES
LPPSSQTPKYSESNRTPVKSSMEEDDSFFRQRMFSPMEEKELLSPLSDPDERYPLIVKID
LSLLSRIPGKPYKDADAAKAEKKSAPEKHARESQKQPSDKSSTKGKRKHKQNEDENRASE
SKKTKLEEKAPSGHKNSSSRESSKPSAVKEKDLLPSPAAPALQKDSKQEHGSRKRTVSQS
SSLKSSSNPGKDSSSGSKSNSSSKQKKTEGKGSSSAKEAKEKVLNNSSSCPPASAQATES
VKSRRAKLVFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEK
NAQESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQALLYLRLFKLKK
ESALKYSKTLTEHLKNCYNNSQAPSPGMGSKPVGMPSPVSPKLSPGNSGNYSSGAANPSG
SGSSVTIPQRIHQMAASYVQVTSNFLYATEIWEQAEQLSREQKEFFAELDKVMGPLVFNT
SIMTELVRYTRQGLHWLRLDAK
NT seq 3489 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaccggaatgtgctgcgcatgaaagaaagggaaaggcgaaatcaagaa
attcagcagggtgacgaagccttcccacccaactctcctctctttgctgaaccatacaaa
gtgaccagcaaagaagacaagctgtccagccgcatccagagcatgctggggaactatgat
gagatgacggatctcatcggggaccggccgctgcagaagatcgtcgccattcccaagccc
tcggtccccgccgcgcccgatgacaaacccacgcccggcttcttcggcgagcagcggcac
ggcgcgggctctcaccagagcagcaaatggaccccggtggggccggcccccagcacctcg
gcccagtcccagaagcgctcggcggggctggggggacacgggcagcgctccgggggcggc
gcggccggcgccggggcccggcacgagcgcgactcctacggcggcggccgcaagaagggc
cagcacggctcggagcactccaagggccgctccggcagccccgggaagcctccggccgtg
tcctcgctggcctccggccactcgagagcccacggcggcgaccaccacggcaaggaccac
cagcgctccaagtcgccccgggaccccgagcccagctgggactctccctcccgcgtgccc
tcgttcgccagcgggcagcactcgaaccagtccttccctccctcgctaatgtccaagtcc
agttcaatgttgcagaaacccactgcctacgtcaggccgatggacgggcaggaatccatg
gaaccaaagttatcctcggaacactacagcagccagacccacggcggcggcgtcaacgag
ctgaagcccagcagcaaagcgcacctgaccaagctgaaaattccttctcagccgctggat
gcatcagcctctggtgaggtgagctgcgtggatgaaatcctcaaagagatgacccactcc
tggcctcctccactgactgccatccacaccccctgcaaaactgaaccctccaaattcccc
tttccaacaaaggagtctcagcagtccagttttggcactggagaacagaaacgatacaat
ccctcatccaaaacatccaatggtcatcaatccaaatcatgtgaatcgaaccagacagat
atgttgaaagatgacttaaaacttagcagtagtgaagacagcgatggagagcaggactgc
gataagacagtgccaaggagcacacctggaagtaattctgagccttcccagcacaacagt
gaaggagcagataactccagggatgactcgagcagccacagcggctccgagagcagctcc
ggctccgactcggagagcgagagcagctccagtgacagcgaggccaacgagccatcccag
agtgcatcccccgagccagagccaccgcccacaaacaagtggcaactggataactggttg
aacaaagttaattcccataaagtgtcaccagcttcttccgtggacagcaatatcccttct
tcccaaggctacaagaaagagggacgggatcagggtacagggagtgggtacactgatcaa
ggtggatccaaggactccatttcttctacaccagggagagattccaaacccacccagaag
ggctcggagagcagtcgtgggaggcagaaatcacctgcccagagcgacagctcgactcag
aggaggactgtagggaaaaaacagcccaagaaagcagaaaaaacatctgtggaagagccc
agagggggtcttaaaatagaaagtgaaaccccagtagacatggcaacaaatatcccttca
aacaggcacaaggcagccaccaaaggctccaggaaacccaacataaagaaggagccgaag
tcttcccctcgacctacaacagagaaaaagaaatacaaggcttcaagcaaatctgcccag
aaatccagggaattcatcgaaacagatacctcatcctctgattcagatgaaaatgagagt
ctgcctccttcctcacaaacacccaaatactctgagagcaataggactcctgttaaatct
tccatggaggaggatgacagcttttttcggcaacggatgttctctcctatggaagagaaa
gagcttctgtccccactgagtgatcctgatgaaaggtacccactcattgtgaagattgac
ctgagcctcttatccaggataccagggaagccttacaaggacgctgatgctgccaaggcg
gagaagaagagcgctccggagaaacacgcccgggaatcccagaaacagccctcggacaag
agctccacaaaaggcaaaaggaaacacaaacagaacgaggatgaaaacagagccagtgaa
agcaagaaaacgaaactggaagaaaaagctccctcaggacacaagaattccagcagtagg
gagtcttcaaagccaagtgctgttaaagagaaggatttgctgccctcccctgctgcccca
gccctgcagaaggattccaagcaggaacatggctccaggaagagaacagtcagtcagtcc
tcatccctaaaatccagcagcaacccaggcaaggacagcagcagtggcagcaagagcaat
tcctcttccaagcagaagaagacagaggggaaggggtccagcagtgccaaggaagccaag
gagaaggtcctgaacaattcctccagctgccctcctgcctctgctcaggccacggaaagt
gtgaagtcgaggagagcaaagcttgtttttgatgataggacttactcagctgatcactat
ttgcaggaagcaaagaagctgaaacataacgcagatgctttgtcggacaggttcgagaag
gccgtgtactacctggatgctgtcgtgtccttcattgagtgtgggaatgcattggagaaa
aatgctcaggaatccaagtccccgttccctatgtattcagaaactgtggaattaatcaaa
tacactatgaaactgaagaattatttggccccggatgcgacggctgcggacaaaaggctg
gcagtgctttgccttcgatgccaagctctgctgtacctgaggcttttcaaactgaaaaag
gaaagtgcattgaaatactcgaaaactctgactgaacatctgaagaattgctacaataat
tctcaagcaccgtcacctggtatgggaagcaaacctgtcgggatgccatctccagtctct
ccaaagctgtctccagggaattcaggaaattattcttccggggcagccaacccttcaggg
agcgggtcctcggtgacgatcccgcagcgcatccatcagatggctgccagctacgtccag
gtcacctccaacttcctctatgccactgaaatctgggaacaagcagaacagctctcgaga
gaacagaaagagttctttgctgaactggacaaggtgatggggcccctggtgtttaacacg
agcatcatgacggagctggtgcgttacacccggcagggcctgcactggctgcgcctcgac
gccaagtga

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