Pseudopodoces humilis (Tibetan ground-tit): 102103178
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Entry
102103178 CDS
T02921
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04115
p53 signaling pathway
phi04210
Apoptosis
phi05164
Influenza A
phi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102103178 (APAF1)
04115 p53 signaling pathway
102103178 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102103178 (APAF1)
05168 Herpes simplex virus 1 infection
102103178 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
APAF1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WHD_APAF1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NB-ARC
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
NBCH_WD40
CARD
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
eIF2A
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_SCAP
CARD_2
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Ge1_WD40
WD40_like
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_RSE1_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_WDR11_2nd
AAA_16
B-prop_COPA_B_2nd
AAA_22
WHD_Dark
nSTAND6
DUF2415
Motif
Other DBs
NCBI-GeneID:
102103178
NCBI-ProteinID:
XP_005519511
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MDVKSRNYLLMNRQALENDIKTSYIMDRMIADEVLTLQEEERVKQQNTRKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHESTLSQRPPLNIEEAKDRLRLLMLRKYSRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGIKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSYD
YEAVDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDC
MYWYNFLAYHMAGAKMQQELHDLMFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLEINAHDDEILC
CAFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSSD
TYIKIWDLNKKYCRNTMIGHENSVNHCRFSPGDEYVASCSTDGTVKLWEARSGNELKSIE
IKDFFKNADEQSDDVEVLVKCCSWSRNGNMLLVVAKNKLLLFDINTCGLLAQVIVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKNLQLINGNTDNVIMQTAA
QESPISCCCLSEDLKFAAFGQENGTIKVLQLSDGKVLKSWEAYRISVQHCRFTPDCQTLI
SSAHDSVIQVWNWQLSECVFLRGHKEAIKDFRLLEDSKLLSWSFDGTVKVWNVTTGNSEK
DFACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSALHELKGHEACVRCCTFSPNN
KLLATGDDKGEIRIWDIFTGALLHFCSPVTVDEGEPTHGGWVTDLSFSPDNKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKF
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaaagtagaaactatttgctgatgaatcgtcaagcactggaaaatgacatc
aagacttcttatatcatggatcgtatgattgctgatgaagtgctaacattacaggaggag
gagagagtgaagcagcagaatacacggaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactgctccatgaagggtac
agagatcttgctgcacttctccaggacggcatccctgctgtttcatctggtaacagaaag
agttcaatggatggaatgacttcttacgtgaagaccattctctgcgaagggggtgtgcca
cagagaccagttgtgtttgtcactcgaccaaagctcgtagatgctattaaaaagaaactg
tactgcttgggaagtgatccaggctgggtcacggtttatggaatggcaggctgtgggaag
actgttttgacagcagaagctttaagggatcctcagctcttggaagattactttccagga
ggagttcactggatctctgttgggaaacaggacaaagcagggctcctcataaaacttcag
aatctctgtagtagattggaacatgagtccactctttcacaaagaccaccacttaacatt
gaggaggctaaagatcgtcttcgtttgctgatgttacgcaaatactccaggtctcttttg
gtcctggatgacatttgggattcctgggtgttaaaagcatttgataatcaatgtcaggta
ctcatcacgagcagggacaggagcgtaacagatgctgtggctggtattaaatacgaggtt
catgtggaaagtgggctagcacatgagaaaggactggagattttatccctatttgtgaat
atgaaaatatcagagcttccagaacaagctaactctcttgtaagagaatgcaaaggttct
cctcttgtgatatccttgataggtgcgttactacgagacttccctagccgctgggaatac
tatctcaggcagctgcagaataagcagtttaaaagaataagaaaatcttcctcatatgat
tacgaagccgttgatgaagcaatgtccataagtgttgagcaactggatgacaattacaaa
gactactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaggttgaagatatactacaggaatttgttaac
aaatcactgttgttctgtgatcggaatgggaagtcattccattattatttacatgatctt
cagcttgactttctcacagagaagaatcgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatactacaagcttaatacacctgttctgtctcaagaggattgc
atgtactggtataacttcctagcatatcacatggcaggtgccaaaatgcagcaggagctc
catgatcttatgttttctttggattggattaaagctaaaacagaattggtagggcctgct
catctgattcatgaatatgtagaatatagttcaatcctggatcaaaaggatagcacagtg
cgtgagaatttccaggaatttctgtctttaaatgggcaccttcttggacggcagccattt
cctgacatcattcagctgggtctttgccagccagagacgtcagaggtgtatcaacaggcc
aagctgcatgcccaaagggaaacaggaacattttatttagagtggataaataaaaaatcc
ttgaaaaatctctaccgtctggttgttcgtccacacagagatgcagtttaccatgcctgc
ttttctaaggatagacaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagacttctggagataaatgcccacgatgatgaaatactctgt
tgcgctttttctgcagatggtgaatttgtagcaacttgttcaagtgataaaaaagtcaag
gtctggaattcaagaacaggccagtgtaggtgtgtatacgaagaacactccgagcaggtc
aactgctgccagttcaataacaaaagtggtcagtaccttctggccacctgctccagtgac
acttacatcaaaatttgggatttaaataaaaaatactgtagaaatacgatgataggtcat
gaaaattctgtcaatcactgcagattttcaccaggtgatgaatatgttgctagctgctca
acagatggaacagtaaagctttgggaagcacgctcaggaaatgaactgaaaagtattgag
ataaaagatttcttcaaaaatgcagatgagcaatcagatgatgtggaggttttagtaaaa
tgctgctcttggtccagaaatggtaacatgcttttggtggtagccaaaaacaagcttttg
ctttttgatatcaacacctgtggtttgttagctcaagtcattgtcagccatcacagcaca
atccaatactgtgacttctgtcctggggatgagttagtagcagttgctttgtctcactgc
tccgttgagctatggaatattaagtctttatcaaaagtggcatattgcagaggacacatg
agctgggttcactgtgtgacattttcaccagatggatctttatttctgacttcatctgat
gaccagacaatacgcatctgggaaacaaagaaggtgtgcaagtcttctgatgctgtgctg
aaaagtgaactagatgttgtatttcacaatggtgaagtgatgattttagccatctacaat
cagaagaatttacaacttatcaatggaaatacagacaatgttattatgcagacagcagcc
caagagtctcccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttggg
caggagaatggaacaataaaggtactacagttgtcagatgggaaagttctgaagtcctgg
gaggcctacaggatatcggtgcagcattgtcgatttacacctgattgtcagactctcatc
tcaagtgctcatgattcagttatacaggtatggaattggcaattgagtgaatgtgtgttt
ctaagagggcacaaggaagcaatcaaggatttcagacttctggaagattcaaaacttctc
tcttggtcgttcgatggaaccgttaaggtttggaatgtcactactggaaattcagaaaaa
gattttgcttgtcacggaggtgctgttctttcctgtgctgtttcacctgatggtagtaaa
ttttcatctgcttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgct
cttcatgaactgaaaggccatgaagcctgtgtgcggtgctgtactttctctcctaataac
aaactattggccactggagatgacaaaggagaaataaggatttgggatattttcactggt
gcattacttcacttctgctccccagttactgtagatgaaggagaaccaacacatgggggt
tgggtaacagacctctccttctctcctgacaataaaatgcttgtgtcatctggaggctat
cttaagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaaca
aacctcaagtcaatacacgtgtcccctaatttcaaagtgtatgtgactgttgataatctt
ggtattctttatgtattacagaagttctga
DBGET
integrated database retrieval system
