Pseudopodoces humilis (Tibetan ground-tit): 102103663
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Entry
102103663 CDS
T02921
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04115
p53 signaling pathway
phi04145
Phagosome
phi04148
Efferocytosis
phi04350
TGF-beta signaling pathway
phi04510
Focal adhesion
phi04512
ECM-receptor interaction
phi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102103663 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102103663 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102103663 (THBS1)
04148 Efferocytosis
102103663 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
102103663 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102103663 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102103663 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102103663 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phi00536
]
102103663 (THBS1)
Membrane trafficking [BR:
phi04131
]
Endocytosis
Phagocytosis
Opsonins
102103663 (THBS1)
Glycosaminoglycan binding proteins [BR:
phi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102103663 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
cEGF
TSP1_ADAMTS
TSP1_CCN
Laminin_G_3
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
102103663
NCBI-ProteinID:
XP_005520402
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MGPATALCLLLLVLGGSETKRTAESRNDDNSVFDLFELIGFMRKGAGRRAPGVYLVKGPE
SSSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQSKKSRGTLLSVEQKDGS
GHVFSLVSNGKAGSLDLSLSVDGKQQLVSVEDVLLATGHWKNITLFVQEDRAQLYVGCEK
MENAELDIPIQSIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS
SSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTL
QDRVRKVTEENEIIAKVVQITPGACIHNGVLHKNKEEWTIDSCTECTCQNSATICRKVSC
PLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRC
EGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKP
CEGEARENKACQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVG
EARGTQVCNKQDCPIDGCLSNPCFAGATCTSAPDGSWKCGACPAGYHGDGIHCQDIDECK
EVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMTNKQVCKPRNPCTDG
THDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHC
KKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDR
CDNCPYNHNPDQTDTDNNGEGDACAIDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQC
DNCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA
CDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEIS
ETDFRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF
INTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPG
EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMA
DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggggccagcgactgctctctgcctccttctcctcgtgctcggcggctccgagaccaag
cgaactgcagagtccaggaatgatgataacagtgtcttcgatctctttgaactcattggc
ttcatgcggaagggagccgggcgccgggcccccggggtgtacctggtgaagggaccagaa
tcctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgactcc
aagttccaagacttattagatgccatccatgctgagaagggcttcattctcctggccact
ctccggcagtccaagaaaagcagaggcactctgctgtccgtggaacagaaagatggctct
ggtcatgtcttcagcctagtatctaatggcaaggcaggctccctggacctgagcctttct
gttgatggcaagcagcagttagtgtcagtagaggatgtcttgctagctacaggacattgg
aagaatatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgagaaa
atggagaatgctgaactggacatccccatccagagcatcttcactagggacctggccagc
agtgccaggctccgtattgccaaagggggagtcaatgacaacttccagggtctgctgcag
aatgtgcggtttgtgtttggaacaactctggaaactatcctgcggaacaaaggctgctcc
agctccacaagtgcaatcattactttggacaaccccatcaatggttccagcccagctatc
cgcactaattacataggccataaaacaaaggacatccaagcagtctgtggattttcctgt
gatgaactgacaaatatgtttgtggaactgcaagggctacggtccatggttacaacactt
caagacagagttcgcaaagtgactgaagaaaatgaaatcattgccaaagtagtccagatc
actcctggagcatgcattcataatggagtcttgcacaaaaataaagaggagtggactatt
gacagctgcactgaatgtacttgccagaactctgccactatatgccggaaagtgtcctgt
cctctcatgccttgttccaatgccaccgtgcctgacggggagtgctgccctcggtgctgg
cctagcgactatgcagatgatggatggtctccttggtctgaatggacctcgtgttctgtg
acctgtggtaatgggattcagcagagaggccgctcctgtgacagcctcaataaccgctgt
gaaggctcctctgtacagactcggacttgccaccttcaggagtgtgataagagatttaaa
caggatggtggctggagtcactggtcgccatggtcatcatgttccgtcacctgtggcacg
ggcatcatcactagaattcggctttgcaactctccagtaccacagctgaatggcaaacct
tgtgagggtgaagcaagagaaaacaaagcctgccagaaagatccttgcccaattaatggc
aactggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcag
aagcgaagccgtctctgcaataatcccgagcctcagtatggtgggaagacttgtgtaggt
gaagctagagggactcaggtctgcaacaaacaggactgcccaattgatgggtgtctgtct
aatccctgctttgcgggggctacgtgcaccagtgcccctgatggttcctggaagtgtggt
gcctgtcctgctggctaccatggtgatggtattcactgccaagatattgatgagtgcaaa
gaggttcctgatgcctgctttgtcttcaacggagtgcacaggtgtgagaatactgaacct
gggtacaactgtctgccttgtccaccgcgtttcactggaacacagccgttcggccgcagt
gttgaggatgccatgactaacaaacaggtctgcaagccacgtaatccatgcacagatgga
acacatgactgcaacaagaatgccaaatgcaattaccttggccacttcagtgatcccatg
tatcgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatact
gacttggatggatggccaaatgagaacctggtttgtgttgccaatgctacttaccactgt
aaaaaggataactgccctaatctgcctaactcagggcaggaagactatgataaagatggg
attggtgatgcctgtgacaatgatgatgatgatgatggcattcctgatgaccgggacaac
tgtccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgaccgc
tgtgacaactgtccctacaatcacaaccctgatcaaactgacactgacaacaatggagaa
ggagatgcatgtgcaatagatattgatggagatggggtgcttaacgaaagggacaactgc
cagtatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcagtgt
gataactgtccactggaacataaccctgaccaggaagatactgattctgatcgcataggt
gatcagtgtgacaacaaccaggacatagatgaggatggccatcaaaataaccttgataac
tgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcc
tgtgaccatgatgatgacaacgatggtatccctgatgacaaagataactgcagattggtt
gccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgac
tttgaccaagacagtgtgccagacattgatgatatctgccctgaaaatgtggaaattagt
gagactgatttccgaaaatttcagatgattcccctggatcccaaaggaacatcccaaaat
gatccaaactgggttgttcgtcaccagggtaaagaactggttcaaacagtcaactgtgac
cctggccttgcagttggttttgatgaattcaatgctgtggacttcagtggtaccttcttt
atcaatacagaaagggatgatgattatgctggctttgtatttggctaccaatctagcagt
cgtttctatgttgtcatgtggaagcagatcacccagtcttactgggactccactccaacc
aaagctcaaggctattcaggtctctccatcaaagttgtgaattccaccactggtcctgga
gaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttg
tggcatgatccccgtcacataggctggaaggacttcactgcatacagatggcgacttagc
catagaccaaagactggctacatcagggttgtaatgtatgaagggaagaaaatcatggca
gactcaggaccaatctacgataaaacctatgctggtggtcggctaggattatttgtcttc
tctcaagaaatggtgttcttctcagaccttaaatatgaatgcagagattcataa
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