Pseudopodoces humilis (Tibetan ground-tit): 102104526
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Entry
102104526 CDS
T02921
Symbol
RRP8
Name
(RefSeq) ribosomal RNA-processing protein 8
KO
K10260
F-box and WD-40 domain protein 7
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102104526 (RRP8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102104526 (RRP8)
04121 Ubiquitin system [BR:
phi04121
]
102104526 (RRP8)
Membrane trafficking [BR:
phi04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
102104526 (RRP8)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102104526 (RRP8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_8
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
DSE1_N
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_DCAF12
NBCH_WD40
ASA1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
F-box
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_Aladin
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_VPS8
Methyltransf_11
PAC11
WDR90_beta-prop_4th
TRM82_WD
PQQ_2
Beta-prop_IFT140_2nd
Ge1_WD40
Methyltransf_31
WD40_RFWD3
Methyltransf_25
Beta-prop_NWD2_C
Anamorsin_N
PALB2_WD40
Vts1
Beta-prop_WDR19_2nd
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
102104526
NCBI-ProteinID:
XP_014111093
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MEERLLGARFRYLNQQLYTGSSRDAARLFRADPAAFHLYHRGFERQVRRWPERPVQRIVR
YLRRRPASLVVADFGCGDCTLAASVRNQVHCFDLVPLSPRVTVCDMAKVPLAAESVDVAV
FCLALMGTNLQEILGEANRVLKLGGTLMVAEVASRFEDTHAFLKAMTQLGFRTVSKELKG
FTCLDDLLHVKGITTRILELNSQRMTCRRCPRPEGPPRASPTPLGDSEDHRAPAAQVVAE
EEEEEEEEAPGPWEPEHPWKGPPRSRADPDGSGGRGPQEPPRSTREREEEEEEEEEEEEE
GSCCSEEGEDSSNVYLYYTLGERWIDYLQRTGDGGLLRHLRPKMKRKSENGPDGRALSPG
KKLCKGSEYGRTLGPCTPSPTTTFGDLRNAKVGQARRRRIPSVAPPPELQDWLRTFQRWS
GPEKLLALDELIDRCEPAQIKYMMQVIEPQFQRDFISLLPKELALYVLSFLEPRDLLRAA
QTCRYWRVLAEDNLLWREKCREEGIEEPLHLRKRRLLSPGFMYSPWKFAFLRQHRIDMNW
RSGELRPPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGECVQTLVGHTGGVW
SSQMRDSVVISGSTDRTLKVWNADSGECVHTLYGHTSTVRCMHLHGNRVVSGSRDATLRL
WDIETGQCLHVLMGHVAAVRCVQYDGNKVVSGAYDYTVKVWDPESESCTHTLQGHTNRVY
SLQFDGTHIVSGSLDTSIRVWDVESGNCLHTLMGHQSLTSGMELRDNILVSGNADSTVKI
WDIKTGQCLQTLQGPSKHQSAVTCLQFSSKFVVTSSDDGTVKLWDLKTGEFVRNLVALES
GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDLK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcggctgctcggcgcccggttccgctatctgaaccagcagctctacaccggg
agcagccgggacgcggcgcggctcttccgcgccgaccctgccgctttccacctgtaccac
cggggcttcgagcggcaggtgcggcgctggcccgagcgccccgtgcagcgcatcgtgcgc
tacctgcgccgccggccagcgtcgctagtggtggcggatttcgggtgcggggactgcacg
ctggctgccagtgtcaggaatcaggtgcactgcttcgatctggtgccgctgagcccgcgg
gtcaccgtctgtgacatggccaaggtgccactggcggctgagtcggtggacgtggccgtg
ttctgcctggcgctgatgggcaccaacctgcaggagatcttaggagaggccaaccgtgtg
ctcaagctcggggggaccctgatggtggctgaggtggccagccgctttgaggacacccat
gctttcctgaaggccatgacgcagctgggcttcaggactgtctccaaggagctgaagggc
ttcacttgtttggatgacctgctgcatgtcaagggcattaccacacgcatcctggagctc
aacagccagcgcatgacgtgccggcggtgcccgcgccctgaggggcccccacgggccagc
cccactcccttgggagacagtgaggaccacagggcacctgcagcacaggtggtggctgaa
gaggaggaagaggaggaggaggaagcaccaggcccctgggagccagagcacccctggaag
ggtccccccaggtccagagcagaccctgatggttctggggggcggggaccacaggagccc
cccaggtccaccagggagcgggaggaggaggaggaagaggaggaggaggaggaggaggaa
gggagctgctgcagcgaggaaggggaagacagcagcaatgtatacctgtactacaccctg
ggagagcgctggatcgactacctgcagcgcactggggatggggggctgctgcggcacctg
cgccccaagatgaagcggaagtcagagaatgggccagatggccgggccttgtcccctggg
aagaagctgtgcaagggctctgagtatggcaggacactgggtccctgtacacccagcccc
acgaccacctttggggacctgcgcaatgccaaggtggggcaggcccggcgccgtcgcatc
ccctcagtggcccccccacctgagctacaggactggctccgcaccttccagcgctggagc
ggccctgagaagctgctggccctggatgagctcattgaccgctgcgagccggcgcagatc
aagtacatgatgcaggtcattgagccccagttccagcgggacttcatctccctgctgccc
aaggagctggccctgtacgtcttgtctttcctggagccacgggacctgctccgtgctgcc
cagacttgccgctactggagggtcctggctgaggacaatctgctctggagggaaaagtgc
cgtgaggaagggatcgaggagcccctacacctgcggaagcgacgcctgcttagccccgga
ttcatgtacagcccctggaaatttgccttcctgcgccagcaccgcatcgacatgaactgg
cgtagtggggagctgcggccccccaaggtactgaagggccacgatgaccatgtgatcact
tgcctgcagttctgcggcaatcgcatagtaagcggctctgatgacaacacgcttaaagtg
tggtcagctgtcacaggggagtgtgtgcagacgctggtgggccacacggggggggtttgg
tcctcccagatgagggacagtgttgtcatcagtggctccactgaccgcacactcaaggtg
tggaacgctgacagcggcgagtgtgtgcacacgctgtacggacacacctctaccgtgcgc
tgcatgcacctgcacggcaacagggtggtgagtggctcccgggatgccacactgcggctc
tgggacatcgagacagggcagtgcctgcacgtgctgatgggccacgtggcagccgtacgc
tgcgtccagtatgatggcaacaaagtggtcagtggtgcctatgactacacggtcaaggtg
tgggaccctgagagcgagagctgcacccacacgctgcaggggcacaccaaccgtgtctac
tcactgcagtttgatgggacacacatcgttagtgggtccctggacacatcgatccgcgtg
tgggatgtggagagtgggaactgtctgcacacactcatgggacaccagtcactcaccagc
gggatggagctgcgcgacaacatcctcgtgtccggcaacgccgactctactgtcaagatc
tgggacatcaagacagggcagtgcctgcagaccctgcagggtcccagcaagcaccagagt
gctgtcacctgcctacagttcagctccaagttcgtggtgaccagctctgatgacgggaca
gtgaagctgtgggacctgaagacaggggagtttgtgcgaaacctcgtggccctggagagt
gggggctctgggggagtcgtgtggcgcatccgtgcctccaacacaaagctggtgtgcgcc
gtgggcagccgcaatggcactgaggagaccaagctgctggtgctggacttcgatgtggac
cttaagtga
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integrated database retrieval system
