Pseudopodoces humilis (Tibetan ground-tit): 102105183
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Entry
102105183 CDS
T02921
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04010
MAPK signaling pathway
phi04120
Ubiquitin mediated proteolysis
phi04140
Autophagy - animal
phi04144
Endocytosis
phi04620
Toll-like receptor signaling pathway
phi04621
NOD-like receptor signaling pathway
phi04622
RIG-I-like receptor signaling pathway
phi05132
Salmonella infection
phi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102105183 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102105183 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102105183 (TRAF6)
04140 Autophagy - animal
102105183 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102105183 (TRAF6)
04621 NOD-like receptor signaling pathway
102105183 (TRAF6)
04622 RIG-I-like receptor signaling pathway
102105183 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102105183 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
102105183 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102105183 (TRAF6)
04121 Ubiquitin system [BR:
phi04121
]
102105183 (TRAF6)
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102105183 (TRAF6)
Membrane trafficking [BR:
phi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
102105183 (TRAF6)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
102105183 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
PspA_IM30
zf-RING_5
SlyX
Med21
RING_XB3-XBAT31
TRAF3_RING
zf-RING_11
CENP-F_leu_zip
U-box
CEP104_ZnF
DUF4455
Spc29
HAP1_N
DUF16
PUMA_CC
DUF1664
ADIP
HMMR_N
UPF0242
DM
Sina_ZnF
AAA_13
Motif
Other DBs
NCBI-GeneID:
102105183
NCBI-ProteinID:
XP_014107414
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MSLLHSDSSCAAGDSGCCAAMASACSAAAKEESSSVGSGNQPGSFTEETQGYDVEFDPPL
ESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNFAK
REILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECPQCQGTFPKNHLKEHMTQECPR
RQVCCPNCATSMAYEDKELHDQTCPLANVYCEYCNTVLIREQMPNHYDNDCPTAPVPCFY
SAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPALFSHV
SHAAYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHVAELKRTIRNLEGKI
TEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPNAQ
RCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAFQR
PTIHRNPKGFGYVTFMHLQNLKQRTFIKDDTLLVRCEVLTRLDLNSVRREGFQARSTDGA
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctgcacagtgacagcagctgtgcagctggggacagcggctgctgtgcagcc
atggccagcgcctgcagcgccgcagccaaggaggagagctccagcgtcggcagcggcaac
cagcccggctcgttcacggaggaaacgcagggatacgacgtggagttcgatccgcccctg
gaaagtaaatacgagtgtcccatctgtttgatggctctccgggaggcggtgcagacaccg
tgcggccaccgtttctgcaaaggctgcattgtcaaatcaataagagatgcaggtcacaaa
tgtcctgtagacaacgaaattctgcttgaaaatcaactttttcctgacaactttgctaaa
cgagaaatcctttcattaatggtcaagtgccccaacaagggctgcagcatgaagatggag
ctcaggcacttagaggaccaccagctgcagtgtgacttttccactgtggaatgcccacag
tgccaaggaaccttccccaaaaaccatctgaaggagcacatgacccaagagtgtccgagg
cgtcaagtgtgttgcccaaactgtgccacatctatggcctacgaagataaagagcttcat
gaccaaacatgcccacttgccaatgtatattgcgaatattgcaacacagtgctcatcaga
gagcagatgcctaaccattatgacaacgattgtcctactgccccagtgccatgtttttac
agtgccttcgggtgtcctgaaaagatgcaaaggaatgaactggcacgacatatgcaggag
ttcactcaggttcacatgaggatgatggctcagagttttcagaatatcagtgttactgct
gcaaatcctgtacccttcatcaatggcctaccctttgagcctgccctcttctcacacgtg
tcacatgccgcatatgactgcaatccagaagttgaaaacttcaaagaaactattcagcag
ttggaaggtcgtctggtaagacaagatcaccaaatcagggaactcattgctaaaatggag
actcagaacactcacgtggcagaactcaaacgtactatccgaaatttggagggaaagatt
actgaaatggaggcacagcaatgtaatggtatttatatctggaagattgagaacttcagt
ggactgcagaaagcccaggaagaagagagacctgtagtgatgcacagtcctggcttctat
acagggaagcctggctacaagctgtgcttgcgcctgcatatccagttaccaaacgctcag
cgctgcgctaattttatctctctgtttgtccacactatgcaaggggaatatgacagccac
ctgccctggccgttccaaggcaccatacgactttctattttggatcaatcagaaggccca
gaaaggcagaaccatgaagaggtgatggaagccaagccagagctactggccttccagaga
ccgacaattcaccgcaatcctaaaggttttggttatgtgactttcatgcacctgcagaac
ttgaaacagagaaccttcatcaaggatgacacgctcctggtgcgctgcgaggttctaacg
cgcctggacttgaacagtgtccgcagagaagggttccaggcccgcagtactgatggagcc
atgtag
DBGET
integrated database retrieval system
