Pseudopodoces humilis (Tibetan ground-tit): 102105455
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Entry
102105455 CDS
T02921
Symbol
PCDH15
Name
(RefSeq) protocadherin-15 isoform X1
KO
K16500
protocadherin-15
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
102105455 (PCDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phi03037
]
102105455 (PCDH15)
04515 Cell adhesion molecules [BR:
phi04515
]
102105455 (PCDH15)
Cilium and associated proteins [BR:
phi03037
]
Primary cilia and associated proteins
USH complex and associated proteins
102105455 (PCDH15)
Cell adhesion molecules [BR:
phi04515
]
Cadherins
Protocadherins
102105455 (PCDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Ig_Cad99C_N
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
Fibulin_C
RET_CLD1
Cadherin_2
CDH23_a-b
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
102105455
NCBI-ProteinID:
XP_014114963
LinkDB
All DBs
Position
Unknown
AA seq
2030 aa
AA seq
DB search
MVQQLCLWKWFTVGTALAAVLAWALAQNDEDCKLARTGPPATIVPIDEESRNGTILVDNM
LIKGTAGGPDPTIELSLKDNVDYWVILDPIKQTLYLNSTGRVLDRDPPVSIQSIVVQVQC
VNKKVGTIINHEVRIVVRDRNDNSPQFQQQRYYVAVNELTPVGTTIFTGFSGNNGAIDID
DGPNGQIEYVIQYNPNDKTSNRTFDIPLTLSGAVVLRERLNYEEKTRYFVIVQANDRAQN
LNERRTSTTTLTVDVLDGDDLGPMFLPCVLVNNTRDCRPLTYQASLPELTDPTRVNPISV
TPPIQAIDQDRNIQPPSERPGILYSILVGTPEDYPQYFHMNLTTAELTLLKPVNRDLHQK
FDLVIKAEQDNGHPLPAFANLHIEILDENNQKPYFTRSTYEGFILESSPVGTTISDNRNL
TSPLQVVVLDNDVEETKDPQVHLFLNDYTTFFTVTQSGITRYLTLLQPVDREVQQLYTFS
MTASDGVQESVPVTVNIVVIDANDNSPTFSNISYSVKIYTDMRPGEGVIKLTAVDADEGA
NGQIVYEILAGDQGDFTINEHTGLITIAPGVVLAVGRSYALTVRASDSAPPAQRRSSITT
VYIEVLPPNNQSPPRFPQLMYSLEVSEAMRIGAVLLNLQAFDREGDPIKYLIQNGDPQQV
FNLSQSSGLLALGKPLDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNGPVFDMF
LPKNLSVQEEEANAFVGQVRATDADAGVNGQVHYSLANFNNLFRITSNGSIYTAVKLNRE
VRDYYELIVEATDGAVDPRRSTLTLAIKVLDIDDNSPVFTNASYTVCVPENLPPGTVFLQ
LEAKDVDLGADVNYRIRTEEAQQYFALDKHTGELSLRKSLDYESFSDTEATFTFLVEAFD
SKGTMPPGLATVTVRVKDMNDYSPVFSQKLYRGMVAPDAVKGTVITTVSAEDEDPPGTPA
SWVRYKVDVVQFPYSASIFDVEENSGRVVTRVNLNEEPSTVFKLVVIAYDDGDPVKFNTT
TVEIAVLQPSVIPRFTQDEYRPPPVSESAPKGTVVTVVTAAALNQTVVYSIVSGNEEDVF
AINNRTGVISVKKPLDYESVQSYELRVQADSLQVVRSNLRVPSKSNTAKVFIEVKDENDH
APVFTKKMYIGGVSEDARMFSSVLKVKADDKDTGNYSAMQYRLIIPPIKDGKEGFVIEAY
TGLIKTAMLFKNMRRSYFKFQVIATDDYGKGLSSKAEVLVSVVNQLDMQVIVSNVPPTLV
EQNKDQLIGILERYVQDQIPGATVVVESIGARRFGDGYSEEDYTKSDLMVYAIDPQTNRA
IMRNELFKFLDGKLLDINKEFQPYLGQGGRILEIRTPDVVANVKKQAQAVGYTEGALLAL
AVIIILCCMPAILIVMVSYRQFKERQAECAKTARIQMALPAGKPTGAVANNLYEELGDST
MRGYAQQEQQQLLRPSLLRPEELSMESGIDPGQEYYGQDYYSYEHGYELPQYGSRRRLLS
PSGMYDEYGEVVVESDGGYYYSPHGPAAEEGMSPVRGPPSRGPQMEGRPVGVGMDLSQGP
GRGFRSSQGKRRLKAVMHLSRVAVSAHKPVGRAESARSRWKKAKIFPMILQKVKGRKDSS
YAKLLSARQADGDKPMMIRGSYFQKSTDDRPSMRKLNHVLKRISVSRKFQEGLGKDLARG
EEGSERDEAKSGVSISITAESEQEDSDYEKRRKKRRRRTSDESSEKSSSSGSESEDKDYL
KITLDQDEATESTVDSDEETGDLEDSDEDSESSSSSESEEDSSEEDNDEEDSESDEDGSL
SKSSSTRSSYSRSGTSESSSRRSTEMSSVKSRAGSSRGKRSSQKSVSSTASGSDRDTSYK
KTSGSSYKSKTSSASVEIEDTIEEVSEEEEEERADNSNKAVSKTADAKAAGKGKGGHSAA
PGEDSEEESEEEVDPEDSDREDTTSKNESSCLDSEISATSKGTTGTKSSGSAVSGKTATS
PETETQSSDTNRKGMKTRKKVSQESSQAKSDEPLGTGITEPEATGDSTSF
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atggtccagcagctttgtctctggaaatggttcacagtggggacggcacttgctgctgtc
ctggcatgggctctggcccagaatgatgaagattgcaagttggccagaacaggtcctcca
gccacaatagttcccattgacgaggagagtcgcaacggcactatcctggttgacaacatg
ctgatcaaagggacagcaggagggcctgaccccaccatcgagctctccctgaaggacaat
gtggattactgggtgatcctggaccccatcaagcagaccttgtacctgaacagcaccggc
cgcgtgctggacagagatccgccggtgtccatccagtccatcgtggtgcaggtgcagtgt
gtgaacaagaaggtcggcaccatcatcaaccacgaggttcggatcgtggtgcgggaccgc
aacgacaactccccgcagttccagcagcagcgctactacgtggccgtcaacgagttaact
ccagttggaacaaccatcttcacaggattttctggaaacaatggtgctattgacattgat
gatggtcccaatggccagatagaatatgtcatccagtataatcctaatgacaagacttcc
aacaggacctttgatattcctctcactttgtccggagcagtagttctgagggaaagacta
aattatgaagaaaagactcgttactttgtcattgttcaagccaatgaccgagcccaaaac
ctgaacgagcgaaggacgagcacgaccaccctgactgtggatgtgctcgatggggacgat
ttgggaccaatgttcctcccctgtgtgctggtgaacaacacccgggactgcagacccctc
acctaccaagccagcctgccagagctgacagatcctacccgtgtgaatcccatcagtgtc
actccacccatccaagccatagatcaggaccgaaacatccagcctccttctgaacgacct
ggcatcctctattccatcctagttggtactcctgaggattatccccagtatttccatatg
aatctcacaacggctgaactgacgctcctcaagccggtaaacagggatttacaccagaag
tttgacttggttattaaggctgaacaagacaatggccatcctctccctgcctttgccaat
ctccacatcgagatcctggatgagaacaaccagaagccttatttcacacggtctacctat
gagggcttcatcctggaatcctctccagtgggaacgaccatctcagataaccggaacctg
acctcccccctgcaggtcgtggtgctggacaacgacgtggaagagaccaaggatccgcag
gtccatctcttcctgaacgactacaccacgtttttcactgtgactcagagtggcatcacc
cgctacctcaccctgctgcagcctgtggacagggaggtccagcagctctacaccttctct
atgacagcttctgatggagtccaggagagtgtcccagtgactgtcaacatcgtggtgatc
gatgcaaatgataattccccaaccttctccaacatctcctacagtgtcaagatctacacg
gatatgaggcctggggagggtgttataaagctgacggccgtggacgcggacgagggagcc
aatggccagatagtgtatgaaatcctggccggggatcagggagacttcaccatcaatgag
cacacaggcctgatcaccatcgctccaggagtggtgctggcagtggggcgctcctacgcc
ctcacggtcagagcgtctgacagtgccccccctgcacagagaaggagctccatcaccact
gtttacatcgaggtgctgcctcccaacaaccagagccctccacgcttcccacagctgatg
tacagcctggaagtcagcgaggccatgaggatcggcgctgttctgttaaacctgcaggct
ttcgatagagagggagaccccatcaaatacctcattcagaatggagatcctcaacaagtt
tttaatctctctcaaagctctggcctgctggccttgggaaagcccctggacagagagagc
actgaccgctacatcctcatcgtcacagcctcggacggcagacctgacgggacatcaact
gctactgtcaatatagtggtgacagatgtcaatgacaacggaccagtttttgacatgttt
cttcccaaaaacctctctgtgcaggaagaggaagccaatgcttttgttggtcaagtaagg
gctacagatgcagatgctggggtcaatggtcaagtccattacagcctggcaaacttcaac
aaccttttccggatcacctccaacggcagcatttacacagcagtgaaactgaacagggaa
gtgagggattactacgagctcatcgtggaggcgacagacggagctgtggacccccggcgc
tccacgctcaccttggccatcaaggtgctggatattgatgacaacagccctgtgtttacc
aacgcctcctacactgtctgcgtgccagaaaatctcccaccaggaactgtcttcctgcag
ctggaggccaaagacgtggacctgggtgctgatgtgaactataggatccgcactgaggaa
gcccagcagtattttgccctggacaagcacacaggagagctgtcactccggaagtccttg
gattatgagtccttctctgacacagaagcaaccttcaccttcctcgtggaagccttcgac
agcaagggcaccatgcctcctgggctggccactgtcacagtcagagtcaaggatatgaac
gattactcgccagtgttcagccagaagctctacaggggaatggttgctcctgacgcagtc
aagggcacagttatcaccacggtctcagctgaggatgaggatcccccgggcaccccagca
agttgggtccgctacaaggtggatgttgtccagtttccctacagtgccagtatttttgat
gtggaggaaaactctggacgtgttgtcacccgagtgaacctcaatgaagagcccagcaca
gtgttcaagctggtggtcattgcctacgatgatggggacccagtgaagttcaacaccacc
acggttgaaattgcagtgctgcagccctcagtcatcccacgcttcacacaggatgaatac
agacctcccccagtgagtgaaagtgccccgaagggaaccgtggtcaccgttgtcaccgca
gccgccctgaaccagacagttgtgtactccattgtgtcagggaatgaagaggatgtgttt
gccattaacaacagaacaggagtgatctctgtgaaaaagcctctggattatgaaagtgtc
caaagttatgagctccgagtgcaggcagactcactgcaggtggtgagatccaacctgcgg
gtcccctccaaaagtaatacagccaaggtctttattgaagtgaaggatgaaaatgatcat
gcacctgtttttaccaaaaaaatgtacattggaggggtgtctgaagatgccagaatgttt
tcttctgtgcttaaagtgaaggctgatgataaggacactgggaattacagtgccatgcaa
tacaggctcatcattccccccatcaaggatggcaaggaaggctttgtgatcgaggcttac
acggggctgatcaaaactgccatgctcttcaaaaacatgaggagatcctatttcaagttc
caggtcattgccactgacgattacggcaaaggactgagcagcaaagcagaagtgctcgtc
tctgtggtcaatcagctggacatgcaagtgatcgtctccaatgtccctcccaccctcgtg
gagcaaaacaaagaccaactcattgggattttggaacgctatgtccaggaccagattccg
ggggcgacagtcgtggtggaatccattggagcacggaggtttggggatggatattctgag
gaggattacaccaagtctgacctcatggtctacgccatcgacccacaaaccaacagagcc
atcatgaggaacgaactttttaagttcctggatggcaaactgctggatatcaacaaggag
ttccagccctacctgggccagggtgggcgaatcctggagatccgcacaccagacgtggtg
gccaacgtgaagaagcaggcgcaggccgtgggctacacggagggagcactgctagccctg
gctgtcatcatcatcctgtgctgcatgccagccatcctcatcgtcatggtcagctaccgg
caattcaaagagcgacaggctgagtgtgccaagactgcgaggatccagatggctcttcca
gcaggaaaaccaacaggagccgtggcaaacaacctctatgaggagcttggagacagcacc
atgcgaggatatgcacagcaggagcagcagcaattgctgagaccttctcttctcagacca
gaggagttgagtatggagtctggaattgatccagggcaggaatactatggccaggattac
tacagttatgagcacgggtacgagctgccgcagtacgggagccgccggcgcctgctgtcc
ccgtcgggcatgtacgatgagtatggcgaggtcgtggtggagagtgacggtggctactac
tacagtccccatgggccagcagcagaggagggcatgagtccagtcagaggccctcccagc
agagggcctcaaatggaagggagacctgtaggtgttgggatggatctcagccagggtcct
ggaagaggatttaggagcagccagggaaaaaggaggctaaaggcagtgatgcatttaagt
cgcgtggcagtcagtgcccacaaacctgtaggaagagctgagtctgcccgttcccggtgg
aagaaagcaaagatattcccaatgatcctgcagaaagtaaaaggcaggaaagattccagc
tatgccaagctgctgtcagctcgccaagcagacggggacaaacccatgatgatcagggga
agctacttccagaaatccacggatgacaggccctccatgagaaaactaaaccacgtgttg
aagcgcatcagcgtctccagaaaattccaggagggccttggcaaggatttggcacgtgga
gaggaagggtctgaaagggatgaagccaagtcaggagtttcaatcagtatcacggcagag
agtgagcaggaggacagtgactatgagaagaggaggaagaagaggaggaggcgcacctcg
gatgagtcctctgagaagagcagcagctccggctccgagtcagaagacaaagactacttg
aaaataaccctggatcaggatgaggccacagaaagcaccgtggactcggatgaggaaact
ggggatttggaggattctgatgaggactctgaatccagctccagcagtgagtcagaggag
gactcatcggaagaggataatgatgaggaagactctgagagcgatgaggatggcagcctg
tccaagagctcatccacacggagctcctacagcaggtcagggaccagtgagtccagcagc
aggagaagcacagaaatgtccagtgtaaaaagcagggcaggcagctcccgtggcaaacgc
tccagccagaaatccgtgagctccactgcctcaggtagtgacagggatacgagctacaag
aaaacctcaggatccagctacaagagcaaaacctcctctgccagtgtggaaatagaggac
accatagaagaggtgtcagaagaagaggaagaggagagagcagataactcaaacaaggca
gtttctaaaactgccgatgcaaaagctgctggaaagggcaagggaggacactcagctgct
cctggtgaggacagcgaggaggaaagtgaggaagaggttgatccagaggacagtgacaga
gaggacactaccagtaagaatgaatcttcttgcctagacagtgaaatcagtgcaacttcc
aaaggtaccacagggacaaaaagctcaggtagtgccgtgtctgggaaaactgccacgtcc
cctgagactgagactcagagctctgacaccaacaggaaaggaatgaaaacaaggaaaaag
gtgtcccaggaaagcagccaggccaagtcagatgagcccttgggtactggaattacggag
ccagaggccacgggtgattccacctccttttaa
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integrated database retrieval system
