Pseudopodoces humilis (Tibetan ground-tit): 102105698
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Entry
102105698 CDS
T02921
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03440
Homologous recombination
phi03460
Fanconi anemia pathway
phi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102105698 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
102105698 (BRCA1)
03460 Fanconi anemia pathway
102105698 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phi01009
]
102105698 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102105698 (BRCA1)
03036 Chromosome and associated proteins [BR:
phi03036
]
102105698 (BRCA1)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102105698 (BRCA1)
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102105698 (BRCA1)
Protein phosphatases and associated proteins [BR:
phi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102105698 (BRCA1)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102105698 (BRCA1)
Multi subunit type E3
BRCC complex
102105698 (BRCA1)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102105698 (BRCA1)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102105698 (BRCA1)
BRCA1-A complex
102105698 (BRCA1)
BRCA1-B complex
102105698 (BRCA1)
BRCA1-C complex
102105698 (BRCA1)
BRCA complex
102105698 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
102105698 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
BRCT_2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_6
BRCT_3
RING_XB3-XBAT31
zf-Nse
zf-C3HC4_3
zf-RING_5
RTT107_BRCT_5
zf-ANAPC11
Pepco
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
102105698
NCBI-ProteinID:
XP_005531546
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MDFSVITIGQVQDVLSAMQKILECPICLDVVQEPVSTKCDHIFCRFCIFKHISKKKKGVV
ECPLCKTEVSKRSLKENSRFKQLIEGLLETIRAFELDTGVKFLKSHYFHKTSTEVTAAES
LCKESSVIQSKGFRNRRKSAKGNGQENLTLQEASVNIQLTDAKMCRPRNKPQKSDSQKGT
YIELGSESSEEFFKQASKTGFEDKVAIQISSQERLEELESAEKGNENSCNAQPDKLCAKE
ITLPNVIGGSDFSKECLSKKSTQSIAECAKPDQVNVTECQSSALNILAVDLLPEQCDRTG
DASPTVDGDTSFRKNTDEMDKQETQYNSESQEFDLEDSSESRLDKSKEMDADVQSMEAVE
ACEPENDSCHDNELPLEKLPQPETLHSATLNKISKKRLKQSIQKVNEWFSKSNEILSSSS
SLDESAASADVSGEGELCLSDKGSCISEKTDPLADSMEIPAVEGKKRWSKQTVEDIKGKI
FGKTYNNRRRKSNAPSTLRDILPTRRKEDVAAEKCLNDFSKDRLKQKRKTTCVLQPEDFI
KKKKNTEEADRGPQSVNWGLGDAEKNRCDESVSVNESHLSQNRANKTLTEPEEGGEPTCK
KASDKVTTKHCDGEPEMDNCDQKSTKKRSSAAKRCKHSSRNMCALQLVVDRSSVFRDPAE
PQIDSYPSSGEPRKADSEQNPVRRSRRLRLLSEEMTKETRKGVKGARKKNSDCGRSVSGD
QRNVATHSAECKDLCEPQDELSYRPVTNLEGGDLEANEMQVSLKNLSDTAETGRRLFNPS
CQPSNCGSTVPDTCSQDSEILGSPLLLQLPSVSAGKTTSHQTEEVTESPTAFSQECEHDS
QNVPGDLKTEKLPMAKNVLELTKEAEDSDLDTQYLRNIFRHSKRSSFSLFQTPRQAHAVK
DPPPETSDVSCAAQVENKGGKQLQLESLQEEKAAAQNLSRVSEKEKTCESAHVDPVPCFA
VSTREHRDDISQAAEEGTLTPAGVGTAQTEHKNGLLQEEQGNEKPVSNEIGIESKLRQNP
IKSNGSQSDQSNTDDDSRQNDLNTGQEISFSSEVNQAGKTEVVDCKGPVLHFQSTSIICP
ATCQQSPAEISCEVTRTKSSKVVVPVKGNEEQAAHTVSTAMPKCSAAEEEPLGENRDLTD
LSETPNGLLCSDTDIEENSSLCETDRKEQSAVFVKSDNALGKELLKRNANSRPRSGGIQK
SRRRVQKLPSSDEESCEDEDLPCFQTLIFSKSASTPLQTDKQMSSVAEPSVAGCPVSPNV
LPHSVSNDNIVQEVPEAALSNVCVSPSQESECSVSLFSSQSNVSEEPLNGAQELKKHLPE
AHVSKQMSSVNDSKETSQNCSGGLKTTKDECLEFPDIGANLGEASGYDSEISVVEDSCGP
FSQGEILTTQQKNAMQNSLRKLQREMAVLEAALKQNGSQSCEVLPVHRELPHSSTEEALE
TDQMREGKNRSPELVLPSSKSSSTKRSDLEKGPECDSVLKKETPSEKTKPVQEAVQEHRQ
CQLEEENSKEKKSGTRQHSASVSSLSGNVTQCPDNSSCSVRLFTPQAAEATDEPVVAQNT
DKSCGPGHKLKRSECFPVPVLHNATGEKNYTSPVVTKRKEMSIVASGLNHSEHLVVQKFV
KKTQSTLSNHITEGTTHVIMKTDEELVCERTLKYFLGIAGGKWVVSYQWIIQSFKEGRIL
DEENFEVRGDVINGRNHQGPKRARQALTEKIFKGFEICCCGPFTDMTTEHLEWMVELCGA
SVVKQPDLFTHTANSTAVVVVQPDAWKEDVDYRAIHQQSNVAVVTREWVLDSVACYECQE
FSAYLLS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattactattggacaagtacaagatgtgctttcagctatgcagaag
atcttggagtgcccaatatgcttggatgtggtacaagagcctgtttcaacaaaatgcgat
cacatattctgcaggttctgcatattcaaacatatcagcaaaaagaagaaaggtgtggta
gagtgtcctctgtgtaagacagaagttagcaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaacaatccgtgcttttgagcttgacactggagtg
aagtttttaaagagtcattactttcataaaacatccacggaagtcactgctgctgagtcc
ttgtgtaaagaaagttctgtcatccaaagtaaaggcttcagaaacaggagaaaaagtgct
aaaggaaatggacaagaaaacttaaccttgcaggaagctagtgtgaatattcagcttaca
gatgccaaaatgtgtcgcccaagaaacaaaccccagaaatctgattctcaaaagggtact
tacatagagttgggctctgaatcatctgaagagtttttcaaacaggcaagcaaaaccggg
tttgaagacaaagtagcaattcagatttcttctcaagaaaggctggaagaacttgagagt
gctgagaaggggaatgaaaattcttgcaatgcacagcctgacaagctgtgtgccaaagaa
ataacgctaccaaatgtcataggtggaagtgatttctcaaaggaatgcttgagcaagaaa
agcactcagagcattgctgaatgtgccaaacctgaccaagtgaatgtgactgaatgccag
agttctgctttaaatatccttgctgtagacctgctcccagagcagtgtgacaggaccggt
gatgccagtcccacagtggatggggacacatcattcagaaagaacacagatgaaatggat
aaacaggaaacccagtacaacagtgaaagccaagagtttgatttagaagacagctcagag
agcaggctggataaaagcaaggaaatggatgctgatgtacaaagtatggaagctgtagag
gcatgtgaacctgagaatgactcttgccatgacaatgaacttcctctggagaagctgcca
cagccagagacacttcactctgccaccctgaataaaatctccaagaagagactgaagcag
agcattcagaaagtcaatgaatggttttcaaaaagtaatgaaattttgtcttccagttct
tccctggatgaatctgctgcatcagctgatgtttcaggtgaaggagaactgtgtttatca
gataaagggtcttgtatttcagaaaaaactgaccctttggcagattccatggaaattcca
gcagtggaaggaaaaaagaggtggtcaaaacaaacagtagaagacatcaaaggcaaaata
tttgggaaaacatacaacaacagaaggaggaaatcaaatgccccttctaccttgagagac
attttgcctactaggagaaaggaagatgtggctgctgaaaagtgcctgaatgatttcagc
aaagacagactcaaacaaaagaggaagactacctgtgtcctgcaacctgaggatttcata
aagaaaaaaaaaaatacagaagaagcagacaggggccctcaaagtgttaactggggcctt
ggagatgctgaaaagaacagatgtgatgaaagtgtttctgttaatgagagtcacctctct
cagaatagagcaaataagacactaacagaacctgaggagggaggggaacccacatgcaag
aaagcttctgacaaggtcactaccaagcactgtgatggggaaccagaaatggataactgt
gatcagaaaagcaccaaaaaaagaagttctgcagcaaaaagatgcaagcattctagtaga
aatatgtgtgctctgcagttagtagtggatagaagctctgttttccgtgatccagctgag
ccacagatcgatagctatccgagcagtggggagcccaggaaagctgattctgagcaaaat
ccagtcagacgcagcagaaggcttcggttactttctgaagaaatgacaaaagaaacaagg
aaaggagtaaagggagcaagaaagaaaaacagtgattgtggaaggtctgtctctggagac
caaaggaatgtggcaactcactctgctgagtgcaaagacctgtgtgagcctcaagatgag
ttgagttacaggccagtcactaatttggagggaggtgatctggaagcaaatgaaatgcag
gttagtctaaagaatttatctgacactgcagaaactgggagaaggctgttcaatccttca
tgtcagccttcaaactgtggctccactgtgcctgatacgtgttctcaagacagtgaaata
ctaggtagccctctcctcctgcaacttccttcagtgtctgctgggaaaactacttctcac
cagactgaagaggtgactgaatcacctactgctttttcccaggagtgtgagcatgattca
caaaatgttccaggggacttgaaaactgaaaagttgccaatggctaaaaatgtgttggaa
ttgactaaggaagctgaggacagtgacttggacacacagtatctgcgaaatatatttagg
cattcaaagcgctcctccttcagcctttttcagactcccaggcaggcacatgcagtgaaa
gatcctcctcctgaaacctccgatgtatcatgtgctgctcaggtagaaaataaaggtggc
aaacagttacaattggaaagcttacaagaggagaaagcagctgctcaaaacttgagcagg
gtttctgagaaagagaaaacatgtgagtctgcccatgttgatcctgtgccttgctttgct
gtcagcacaagagaacacagggatgacatttcacaggctgcagaggaagggactctgaca
ccagcaggagtagggactgctcagactgagcacaaaaatggattgctacaagaagagcag
ggcaatgaaaagccagtgtcaaatgagatagggatagaaagtaagttgagacagaatccc
atcaaaagtaatggaagccaaagtgatcagagtaacacagatgatgattccagacaaaat
gatttaaacacaggccaggaaatcagcttcagttcagaagtcaatcaggcaggaaagact
gaagttgttgattgcaaaggaccggttctacattttcaatctacatcaataatttgtcct
gcaacttgtcagcaaagccctgctgaaatcagctgtgaagtcactagaacaaaaagtagc
aaagtagtagttcctgtaaagggaaatgaagaacaagcagcccatactgttagcacagca
atgcccaagtgttcagctgcagaggaggaacctcttggagagaatcgtgacctcacagat
ttgtctgaaacccctaatggcttgctgtgctctgatactgatattgaggagaacagcagc
ttatgtgaaactgataggaaagaacaatctgcagtttttgtaaaaagtgacaatgccctg
ggaaaagaactgctcaagagaaatgcaaattccaggccaagatctggaggtattcaaaag
tctcgaagacgagtgcagaaactgccatcttcagatgaagagtcctgtgaggatgaagac
ttaccatgctttcagacattaatcttcagcaaatcagcaagcacacctttgcagactgat
aaacaaatgtcatctgtggcagagccttcagtggcagggtgtccagtgagtcccaatgtg
ttgcctcacagtgtgagtaatgacaatattgtgcaggaagtgcctgaagctgccctaagt
aatgtgtgtgtttcaccaagccaggagtcagaatgctctgtcagcttattttcttcccag
tccaacgtgtctgaagaaccacttaatggagcacaagaactgaagaaacatttaccagaa
gctcatgtgtccaaacaaatgagcagtgtaaacgacagtaaagaaacttctcagaactgc
agcggagggctgaagacaaccaaagatgaatgtctagaatttccagacattggagcaaat
ctaggtgaagcatctggatatgacagtgaaataagtgttgtagaagattcctgtgggcca
ttctctcagggggaaatcctcactacacagcagaagaatgctatgcaaaatagcctgaga
aaacttcagcgagaaatggctgtgcttgaagcagcgctaaagcagaatggaagtcagagc
tgtgaagttttacctgtccatagggagctgccacattccagtactgaggaggcacttgaa
acagatcaaatgagagaaggaaaaaacaggtctccagaattggttctcccatcttctaaa
tcctcttcaacaaagagatcagatctggagaaaggccctgagtgcgacagtgttctaaag
aaggaaactccctctgaaaagacaaaacctgtgcaggaagcagtgcaagaacacaggcag
tgtcagcttgaggaagaaaattcgaaggagaagaaatctgggaccaggcaacacagtgca
tctgtctcatcactttctggaaatgtgacccagtgtccagataactcttcctgctctgta
aggctttttacccctcaagctgcagaagccacagatgagcctgttgtagctcagaacact
gataaaagctgtggcccaggacacaaattaaagagaagtgaatgctttcctgtacctgtt
ctgcacaatgcaactggggaaaaaaattacacaagtccagttgtgaccaagaggaaagaa
atgtcaattgtggcatcaggtctgaatcacagtgagcatctggtggtccagaagtttgtg
aaaaaaactcagagcactttatctaatcacattactgaaggaacaacccatgtcataatg
aaaacagatgaggagctggtgtgtgaacggactctgaagtatttcctgggcattgcagga
ggaaaatgggtagttagttatcagtggataattcagtcttttaaagaaggaagaatactg
gatgaggagaactttgaagtcagaggagatgtaatcaatgggcgaaaccatcaaggtcct
aagagggccagacaggccctgactgaaaagatctttaaaggctttgagatctgttgctgt
ggacctttcactgatatgactacagagcatctggagtggatggtggagctctgtggtgcc
tctgtggtgaagcagcctgacctgttcacacacacagcaaattctactgctgttgtggtt
gtgcagccagatgcttggaaggaagacgtggattatagagcaatccaccagcagagcaac
gttgctgtggtaactcgggaatgggtcctggacagcgtggcttgctacgagtgccaggag
ttcagtgcttacctcctgtcctaa
DBGET
integrated database retrieval system
