Pseudopodoces humilis (Tibetan ground-tit): 102108710
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Entry
102108710 CDS
T02921
Name
(RefSeq) uncharacterized protein C5orf42 homolog isoform X1
KO
K22859
protein JBTS17
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phi03037
]
102108710
Cilium and associated proteins [BR:
phi03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
102108710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
102108710
NCBI-ProteinID:
XP_014112485
LinkDB
All DBs
Position
Unknown
AA seq
3194 aa
AA seq
DB search
MEIKLDVLISTCIKQRKPWPRVSWVGQEKEAVFLLDGKHINEINLVSGKTKKKIPSLQSL
LKNVVVLTTSGNAAWLAGILTTGELFLWNKDQDCLKIVPAIEESKKVVAAAQECSMRLSL
YVSGDGRKVLLITPTACAFLWESSEHENTTSGRNSPGHWTQILPDESVILPSAEEKEIGM
DAAFIQNEVLGDCCLCSFVFYSRECLMLTFLILRWHENTFKNVSSLPYQIQWVQQTCSLV
NMVPQCVSVKSRGALLCAFSRDGLLLAVAVNQTDPKATQVLFLNTLNFVTVLGSLKGCSS
KNNMTPSRFIRSYWVGDMSWTPDSLFLACMLKRGCLVLLTCMGELLTLIASGCSVEFGPA
QFIPFHPLITYRQHHSCCQDSSQSLGSSDSERDLMRQRFSVASHSRLPFLIVSDGYMITL
LRFPNNFSPSGFIRSLLLDSTQQLENIRQNLLNFKCKGRSWYFRSLLSLKAGLLKQVQNQ
SSIFSTIPRFLKDDTTELNEKTMDLLDHEEESDNEKQFYNSPSTFYNQRIYSFVGKADEG
CLEFASMFDTIHVEDDIEEKEKSSLELYSIQKNLLGAWQIGISKNMEDKDELLNYTVNCI
IHFFSIVQFVKCTSLNQDASLNKSVKNTQWVHCVLKYFQQCLTVLYWHSRASVTGHVAKL
TLETLKLMFIQQQDQLFSKNLLACFCLLKMVSHTLSRVCVLQYENFFASPDSNILVELDS
LTVPVFLVLDDDTTQQFSSLKSLLRECPQVNHDAKTEKRLTVLWQLLYKKVVWYQVQLKR
KMNKNEEEASVVSLLLSHIQATIQSSGMTLEQHLKINSISGEEQFLLGSYRESVDIWKRS
LCELKTKGGKRAYFLQRRYYLAILFCHLYQYNLCEAQGLCDHLVREILRRSRLSTSQMEN
FSDIKYFQHELWIVTSIHTDTAMAVIRSMARFMAAYFTKQLLYIFPPHSVDILHPLHIKQ
DLRSRVIPLQHCLVTRAVRDQNLSSVWTAEYALDLFFIGGLIPEAVWLAHTLGDWKLSVS
IGLAYQLYYQNSDELSRMKEPECHLPLSLLPMQTFQEKLQSLLGQPVTSETSGHIKHKKF
TDPIEEEDADFLYSSIQELLKAAVMADVDILSETFQLLMDSAKDLCRKFYGLVPVGLCLP
APPLYCPQPTSLSEEGSDDILLKTEKEVRQKVSGILQRIILLFRAAHCSCSAAQWYITQL
KWARKVMQKIRMKGSLPLLSPFPETLLRYCNFCTVLYGSTSSGAHQFDDITCKILGWFRE
FCALCWMFHVREKLSDSCRRYQTARENSNDIKDPNKNGYDAYITEHCLNAVEWACRMLPF
CRFMNIEELVQDVILSLLGELPPVKKVAEIFVKAFPNPEDIRVSLRDKYHGLQQRLRHST
VKVCPESEEMMSAVIQTAEEVRKKALRYVVKNIGLVEINIWEPVEEGASENEEHSYDRFS
LGTSLSTSTVTDVGNPQVYSDADTADTHSDALLTEGTRAQAPSFPRENELQQQKEIGSKN
TTHKIKAPNYKTKHKDKVCRRDMLNQCNLPIVGAWEFERDDDEYVRFLELFLSYVLERDL
VKYSGLGIPFLSSFSGALQKHELNSLFFDIHTTLKRRKSKTRSQSVFRAGSCYTVTLASS
GLEKVSGCNENKNILEKPTIVYSVGQTTEPSVCNLPKGLKEGLFGLKYKSIYRAQTDSQG
VTVPLTSQTLPSHSSSTLQTQAISKYVYKTLDVADIVPAEELPIELMGKLSNISKLLEWM
IRWSDKRLLCGSNKRDSLEETLPMIHVKTSSAAVLTSFWLLEQLYGDRTQTRSEKCKRPD
DQYLKEIASLSEAQSRTEEESSMAESSSTVASSPLDIQIVHVYDNLCESDLGRASAKSKY
FYKKESSHGNNSVPHITEDLNEVRSFVQQELDVTSEQEFFEKPYETSKSSSSSVKIRPVE
HQREQGAIPWDSTTQIPEEAKVCSPEVKQVAISAIDSAQEDQNVDETKEEKAEQNIMTEV
VTSTLSHSFSLKQDAEVPSADMSVSDSQPSQTAVSTMSSLASRTSVCAKKQEVKEEVPRE
EKPNTSETVKQMLQDEMFKLVQLQQINFMSLMQMVQSSFTNVPNIQQMLQQHQSVHLAGS
QPAHTAKNNTPPKTQVPTQEKGKTGQESSVVQPRKSVEDEGNDRQIENHLDTSTSLTLFE
ISCKEMGLMSPSQDLHSSVPTKPLHLLTPSSGIQKKMRLIPIEKKISYSNGFPLLKLESS
YHVKPAFLHPTEMSSAFSRPSPVPQVAWSSSDTVWNHQSSYTPRKSRAEDFHRSRYNPEI
PRRMHEEKERWAEIVHKGPPKHLHSDQREGQQEDSPQAPLPANVSVFKAPTTQNLATFPL
LHLQLDPIPRVPPAVRQPVTTTLIPIKPPKKDGDSRETLRDAGISLLQINLPQKKKAPKL
IPFQDLLAFEQRHKHHSVPSTSFGQGQTKAIHLLRTDLEPFELRDAQNNRKSKKRRSKKQ
LREKEDKKKLSVSFRPDDSIINISDTAVVTESETGDHRPKSTSYVQDDFFISMDAMEKAS
SVSADLHYLASVGKKTAETQDASTNTNPVLTSYQDPGISGGNEVSKVQNNALVTSVPASE
SPSSSVILLPDMYLNLSFPTEVNEKPLPSFLSDAPDLHKREYISVTDIEDGDILRNLPVI
PESAEEIAAAQQNEKLQIPSTAKLHHTAASVTNAALPGALQKQDDHQKNVSNRLQKKDNS
DSATDIVTWNIAHEDEGTLPSSGLPSKVIEKEYFSTKQKEMDMQLQTLQNIVESMEQDFR
NSKMLVKLIEDFEMAADSDLGAHPAVLEAAGVIGAESEHHLTHMIFEDVIDDQKESLNLE
YPMPRSATVDAHSPASAALASTRSGSHICRDLRPSSLEDPLQITGPSDVTDIVNGRVGES
DASLLELGFARARAKKISRVLDSASGHSQRTEKERKEIQTWMKRKQKERMREYLKKLDEQ
RQKERHPFDLRKNTHHNPTSKDIRVFQKKKEEKDKALLSEHHRIRISQALSLMNEMLSET
VSGDHRTLSSTRSPQAYRRNAASSTGGHLNSPVLAERSRIAAKPGFGQKVQRFTPALGLT
QSRGNACMLLQKSTSRRRPRNATNCPVISKHSAECRVSRSSTQKPPQVATAVQTEGVDLD
TDRDVVSPWTVPDDIQRILQDTDDSMFQASAVHGMSFSPLSSIITDNASESTGSILSKLD
WNAVEAMIADVEDK
NT seq
9585 nt
NT seq
+upstream
nt +downstream
nt
atggagattaagctagatgtgctcatctctacatgtatcaagcagagaaaaccatggcct
cgcgtatcgtgggttggacaggaaaaagaagctgtttttcttctagatggtaaacatata
aatgaaattaacctggtgtcagggaagacaaagaagaaaatcccttcgctgcagtcattg
ttgaaaaatgtggttgtcttaacaacgtcaggaaatgctgcttggttggcaggaatactt
acaacaggagagctctttctttggaataaagatcaggactgcttgaaaattgtaccagca
attgaagagtccaagaaagtagtagcagcagcacaagagtgttcaatgaggttgtccttg
tatgtatctggagatggcagaaaggtactgttaattactcctacagcatgtgcctttttg
tgggagagctcagaacatgaaaatacaacctctgggagaaactctcctggacactggaca
caaattttacctgatgaatcagtcatattgccttctgctgaagaaaaagaaattggaatg
gatgctgctttcatacaaaatgaggtactaggcgattgctgtttgtgttcttttgtattt
tactctcgcgagtgtttgatgcttacatttttgattcttcgatggcatgaaaataccttt
aaaaatgttagttctttgccataccagatccagtgggtacagcagacttgttctcttgtt
aatatggttcctcagtgtgtgtctgtaaagtcaagaggagctctgctatgtgcattttca
agagatggacttctgcttgcagtagctgtaaatcaaactgatccaaaggcaactcaggtt
ttgtttttaaacacattgaattttgtaactgttttgggtagccttaaaggttgtagtagc
aagaataacatgaccccatccaggttcatcagatcttactgggttggcgatatgagttgg
actcctgatagccttttcttggcttgcatgttaaaacgtggatgtttggttttattgaca
tgtatgggggaattgctgaccttaattgcttctggatgctctgtagaatttggaccagca
cagtttattccatttcatccactaataacatacagacagcaccactcttgttgtcaagat
tccagccaatctcttggttcttcagattctgaacgtgacctcatgagacagagattctct
gttgcttcacattcaagactacccttcctcattgtctctgatggatacatgataacactg
ctaagatttcctaacaacttttcaccatcaggatttataagatccctcttgcttgattca
acccaacagcttgaaaacatccgtcagaatttgctgaacttcaagtgtaaagggagatct
tggtacttccgatcactgttgtctttaaaagctggtcttttaaaacaagttcaaaatcaa
agttctatcttttccactattccaagattcctgaaggatgatacaacagaattgaatgag
aaaaccatggatttactggaccacgaagaagaatcagacaatgaaaagcagttttacaat
agcccttccaccttctataaccaaagaatctattcatttgttggtaaagctgatgaaggc
tgcttagaattcgcatcaatgtttgataccatccatgtagaagatgatattgaagagaaa
gagaaatcatcattggaactgtattccattcagaaaaacctccttggtgcatggcagata
gggatttcaaaaaatatggaagataaggatgaattactgaattacacagtgaactgcatt
atccattttttcagcattgttcagtttgtgaaatgtacttcgctaaaccaggatgcgtct
ctaaacaagtctgtgaagaatactcaatgggtgcattgtgtcctgaaatattttcagcag
tgtttgactgtcttatactggcattcaagagccagtgtgactggtcatgtggcaaaactg
actttagaaactttaaaactgatgtttatacagcagcaagatcagttgttctcaaaaaac
cttttggcatgcttctgtcttttgaaaatggtttctcacaccctaagcagagtgtgtgta
ctacagtatgagaatttttttgcatctcctgacagtaatattcttgtggaacttgactcc
ctcactgtgcctgttttcttagttcttgatgatgatactactcagcagttcagctcactg
aaatctctgcttagagaatgtcctcaagtaaaccatgatgcaaaaacagaaaaaaggttg
actgtactatggcaactattgtataagaaagtggtttggtatcaggtgcagctgaaaagg
aaaatgaacaagaatgaagaagaggcttctgttgtctcattgcttttaagtcatattcaa
gcaaccatccagtcttcaggaatgacattagaacaacatctgaagattaattctatatct
ggtgaggagcagttccttttaggctcatacagagaatctgtggatatttggaaaagatct
ctttgtgaactcaagacaaaaggagggaaaagagcgtattttcttcagcgtagatactat
cttgcaatattgttttgtcacctgtatcagtataatctgtgtgaagctcagggactctgt
gatcatctggtaagagagattttaaggcgatcacggctctccacaagccagatggaaaat
ttttctgatatcaaatattttcagcatgaactatggatagtaaccagcattcatactgac
actgccatggctgtgattcgatccatggcgcgattcatggctgcttatttcacaaagcag
ctgctctatatctttccccctcacagtgttgacatccttcatccactacacatcaaacaa
gacttacgttctcgtgtcattccactgcaacactgtttggttaccagagctgtcagggac
cagaacctttcatctgtgtggacagctgaatatgctcttgatttgttctttattggtgga
ctcattccagaagctgtgtggttagcacacacacttggggactggaagctctctgtttca
attggtctggcctaccagctgtattatcagaactctgatgagctctcaagaatgaaagaa
ccagagtgtcacctgccattaagcttattaccaatgcagacttttcaggaaaagttacag
tctttgttaggacagccagtaacttctgaaacttcgggacacattaaacacaagaaattc
acagatcccattgaagaggaagatgcagattttctttacagttcaatacaggaactatta
aaagcagctgttatggcagatgttgatattctctcagagacatttcagcttttgatggat
tctgccaaggatctttgcagaaagttttatggtttggttccagttgggctctgtcttcca
gccccaccattgtactgtcctcaacccacttctctcagtgaagaaggcagcgatgacatt
cttttaaaaacagagaaagaagttcgtcagaaagtttctggaattcttcagcgaattatc
ttgctcttccgggctgctcattgttcttgctctgcagcacagtggtatattacacagctg
aagtgggctagaaaagttatgcagaaaattcggatgaaaggctctcttcctctgctaagt
ccattcccagagactttgcttcgttactgcaatttctgcactgttctctatggatctaca
tcttctggagcccatcagtttgatgacattacctgtaaaatcttgggttggttccgagag
ttctgtgcattatgttggatgtttcatgttcgtgaaaaattatctgacagctgtaggcgg
taccaaactgcaagggaaaatagtaatgatatcaaggatccgaataagaacggatatgat
gcctacatcactgagcattgtctgaatgcagtagagtgggcttgtcgaatgcttcctttc
tgcagatttatgaatattgaagaattagttcaagatgtaattttgagtctgcttggagaa
ttgccaccagtaaaaaaggtggcagagatttttgtgaaagcatttcctaatcctgaagat
ataagagtttcactaagagataaatatcatggacttcagcagcgactcagacacagtact
gttaaagtatgtcctgaaagtgaagaaatgatgtctgctgttatacagactgctgaagaa
gtgaggaaaaaggccttgagatatgtagtaaagaacataggccttgtagaaattaatatt
tgggagccagtagaagagggagcatcagagaatgaggaacacagttatgacagattctca
ctaggcacaagtctaagcacaagcacagttactgatgttgggaatcctcaggtgtatagt
gatgcagacacggcagacacacattctgatgctttgcttactgaaggaacaagagctcaa
gcaccttcattcccaagggaaaatgaactccaacaacaaaaggaaataggtagcaaaaat
accacccacaagataaaagctcctaactataaaacaaaacataaagacaaagtgtgtagg
agagacatgcttaatcaatgtaatttgcctatagttggggcatgggaatttgaacgtgat
gatgatgaatatgttagatttttagaactctttttgagttatgttcttgagagagacctg
gtaaagtatagtggccttggaattccatttctcagtagcttttctggggcacttcaaaaa
catgaattgaactctctcttttttgatattcacacaacactaaaacgccgaaaaagcaaa
actagaagtcaaagtgtgtttagagcagggtcttgctatactgtcaccctggcatctagt
ggccttgaaaaagtgtctggctgtaatgaaaacaaaaatattttggaaaaaccaacaatt
gtatactctgttggacagaccacagaaccttctgtgtgtaacctaccaaaaggacttaaa
gaaggcttatttggtctaaaatacaagtcaatatacagagctcagactgacagtcaagga
gtcactgttccactaacaagccagaccttgcctagccatagttcctctaccttgcaaact
caggcaatttctaagtatgtttacaaaactctcgatgtagctgatattgtaccagcagaa
gaactgcctatagaattgatgggcaaattgagcaatatttcaaaattgctggagtggatg
atcagatggtccgataaaagactgctctgtggttccaataaacgagattccttagaagag
actctcccaatgatacatgtgaaaacatcatcagcagctgtccttacatctttttggttg
ttagaacagttatatggagacagaactcaaacaaggagtgaaaaatgtaagcgtccagat
gatcaatatctgaaagaaattgcatctctatcagaagcccagtctagaacagaggaagaa
agtagtatggctgaaagctcttccacagtggccagttctcctcttgatatccagattgta
catgtctatgataatctttgtgaaagtgatttgggcagagcatctgcaaagtcaaaatat
ttctataagaaggaaagtagtcatggaaataattctgtgcctcatataactgaagacctg
aatgaagtgagatcgtttgttcaacaggagttggatgtaacatcagaacaagagttcttt
gagaagccatatgaaacttcaaagagctccagtagctctgtcaagataagacctgtagaa
catcaaagagaacagggtgctatcccatgggactctaccacacagatccctgaagaggcc
aaagtctgctctcctgaagtgaagcaggttgccatttcagctatagatagtgctcaagaa
gatcaaaatgtggatgaaacaaaggaagaaaaggctgaacagaatattatgactgaggtt
gttactagcaccctttcccactcattctctttaaaacaagatgcagaagttcctagtgca
gacatgtctgtaagtgattctcagccttcccagactgctgtgtcaactatgtcgagtctt
gcctcccgtacttctgtttgtgcaaagaagcaagaagttaaggaagaagtccctagagaa
gagaaaccaaacacatcagaaactgtcaagcagatgctgcaagatgaaatgtttaaatta
gttcagctacagcagatcaacttcatgagtttaatgcaaatggtgcagtcatcctttacc
aatgtgccaaatatacaacaaatgttacaacagcatcaatccgttcacctggcagggagc
cagcctgcacacactgctaaaaacaatactcctccgaaaacacaagtgcctactcaagaa
aaaggaaaaactggtcaagagagctctgttgttcagccaaggaagagcgtagaagatgaa
ggcaacgatcgccaaatagaaaatcatctggatacgagtacctctttgacattatttgaa
atcagctgcaaagaaatgggattaatgtcaccatcccaagatttgcactcttcagtgcct
acgaaaccacttcatctcctcactccttcctcaggcatccagaaaaaaatgaggcttatc
cctattgaaaaaaaaattagttactcaaatggatttcctttgcttaagcttgaatcaagt
tatcatgtcaaaccagcatttttacatccaacagaaatgtcatcagcattttccagacca
tccccagtaccacaagtagcttggagttcgtcagataccgtatggaaccatcagtcatca
tacacaccaagaaagagtagggcagaagatttccacagaagtagatacaaccctgagatt
ccaagacgaatgcatgaggaaaaggagagatgggcagaaatagtgcataaggggcctccc
aaacatctgcattcagatcagcgtgaaggacagcaagaagattcacctcaggcaccactc
cctgcaaatgtgagtgtgttcaaagcaccaacaactcagaacctggccacttttccactg
ttgcacttgcagcttgatccaatacctagagttccaccagctgtaaggcagccagtcact
actactttaatacctattaaacctccaaaaaaggatggtgactccagagaaacactacgg
gatgcaggaatatcactccttcagattaatttacctcagaaaaagaaggcaccaaaactc
atcccatttcaagatctccttgcatttgagcaacgccacaagcatcattctgtgcccagt
acttcctttggacaaggccaaaccaaagctatccatctactaagaactgatcttgaacca
tttgaacttagagatgcgcagaacaatagaaaaagtaaaaagaggcgtagtaagaaacaa
ctgagagagaaggaggataagaagaaactgagtgtgtccttccgtccagatgactccatc
atcaatattagtgacacagctgtggttactgaatcagagactggggatcacagaccgaaa
tcgacatcttatgttcaagatgattttttcatctcaatggatgcaatggagaaagcaagt
tctgtctcagcagatctacattatttggcttctgtaggaaaaaaaacagcagaaactcaa
gatgcaagtacaaatactaacccagtgcttacatcatatcaggatcctgggatcagtggt
ggaaatgaggtttccaaagttcaaaacaatgcgctggtcacatctgttcctgcatcagaa
tcacctagttcctctgtgatactactgccagacatgtatttaaacctgagtttccccact
gaagtgaatgagaaacctttaccatcctttctgtcagatgcacctgatttgcacaaaagg
gaatatatcagtgtgactgacattgaagacggtgacatccttagaaatttgcccgtgata
cctgagtctgcagaagagatagctgctgcacagcagaatgagaagcttcaaattccatct
actgcaaaacttcatcacacagcagcttctgttactaatgcagctctgcctggggcactt
cagaagcaagatgatcatcagaaaaatgtgtcaaacagattgcagaagaaagataactca
gattctgctacagatattgtaacttggaacatagcgcatgaagatgaaggaacccttcct
tcttcagggcttccatccaaagtaattgaaaaagaatacttttccacaaagcagaaagaa
atggatatgcaattacagacactacagaacatagtagaaagtatggagcaggatttcaga
aatagcaaaatgttagtgaagctgatagaagattttgaaatggctgctgattcagacctt
ggtgctcatcctgcagtcttggaagctgctggagtcattggtgctgaatcagaacatcat
ttgacacacatgatttttgaagatgttatagatgatcaaaaggagagcctaaacttggaa
tatcctatgcccagatctgctacagtggatgcacactctcctgcctctgcagccttggct
tctacacgttctggttctcacatatgcagagatctacgtcctagctctttagaagatccc
ctgcaaataaccggtccgagtgatgttactgacattgtgaatggtcgtgtgggagaaagt
gacgcctctctgttggagttgggctttgcaagagcacgggctaagaaaatatctagggtt
cttgattctgcttctgggcattctcaaagaacagaaaaggagaggaaggagatacaaaca
tggatgaaaagaaagcagaaggaaagaatgagagaatatttgaagaaactggatgaacaa
agacagaaagaacgtcatccattcgacctgagaaagaatacgcatcataatcctacttca
aaggatattagagtcttccagaagaagaaagaagaaaaagacaaagccctgttgtctgag
catcacagaatcagaatatcacaggcactttccctgatgaatgaaatgttgtctgaaaca
gtgtcaggtgatcacaggacactgtccagcacaagatcacctcaagcttacaggaggaat
gcggcctctagtacaggagggcatctgaacagtcctgttttggcagaaaggagcagaatt
gctgccaaacctggctttggtcaaaaagtacaacgtttcactccagctcttggtttaaca
cagtccaggggaaatgcctgtatgctccttcagaaaagtacctccagaagaaggccgaga
aatgctacaaactgtcctgttatttctaaacactctgctgaatgcagagtcagcagaagc
tcaacacagaagcctcctcaagttgccactgcagttcagacagaaggtgttgaccttgac
actgatcgagacgtggtgagtccttggactgtgcctgatgacatccaaagaatacttcaa
gatactgatgactccatgtttcaggcctctgcagtgcacggcatgagtttctctcctctc
agcagcatcatcactgacaatgcttctgaaagcacagggagcatcctcagcaagctggac
tggaatgcagttgaagctatgatagcagatgtggaagacaagtga
DBGET
integrated database retrieval system
