Pseudopodoces humilis (Tibetan ground-tit): 102110284
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Entry
102110284 CDS
T02921
Name
(RefSeq) protein C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102110284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102110284
Membrane trafficking [BR:
phi04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
102110284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
102110284
NCBI-ProteinID:
XP_005530029
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSALCPPPSPAVAKTEISLNGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRSESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDHIIHTDESF
TPDLNVFQDIVHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctttgtccaccaccatctcctgcagttgctaagacagagatctctttgaat
ggcgagtcaccattattagctgccacttttgcttactgggacaatattctgggcccccga
gtacggcatatctgggctccaaagacagaacaggtacttctcagtgacggtgaaataact
tttcttgctaaccacaccctgaatggagaaatacttcggaatgcagaaagtggtgcaatt
gatgtgaagttctttgttttggctgaaaaaagagtaatcattgtgtcattaatctttgat
ggaaactggaacggagacagaagcacatatggactatcaattatacttccacaaagtgaa
cttggtttctacctgccacttcacagagtatgtgttgataggttaacacatattataagg
aaaggaaggatatggatgcataaggagaggcaagaacatttccagaagattgtcttagaa
ggcacagaaagaatggaggatcagggtcaaagcatcattccaatgctgacaggagaagtc
attcctgtaatggaactcctttcatctatgaaatcacacagtgttccagaagaaatagat
ataagtgacacagtgctaaatgatgatgacattggggatagttgccatgaaggctttctc
ctcaatgcaattagctcacacctgcagacctgtggttgctctgtagtcgtaggaagcagt
gcagaaaaagttaataagattgtgagaacattgtgcctgtttctcacaccgtctgagcgg
aagtgttccaggctctgtagaagtgaatcctctttcaaatatgaatcaggactttttgtt
caaggcttactcaaagatgcaacaggaagctttgtgttgcccttccgccaagtaatgtat
gctccataccctactacacacatagatgtggatgtcaatacagtgaagcagatgccccct
tgtcatgagcacatctataaccaacgacgatacatgagatctgagctgacggcattttgg
agagctaattcagatgaagaaatgtctcaagatcatattatccacactgatgagagtttc
acacctgatttaaatgtctttcaagatattgtgcatagagatacattagtaaaagccttc
ctggatcagatctttcacctgaagcctgggttgtctctaaggagtactttccttgcacag
tttctgctagtccttcacagaaaagccttaactttaataaagtacatagaggatgacacg
caaaaaggcaaaaaaccttttaagtctcttcgtagcctaaagatagatcttgacttgaca
gcagagggcgatcttaacataataatggctttggctgagaagattaaaccaggcctacac
tcctttatctttgggaggccattctacactagtgtacaagaacgtgacatgctcatgaca
ttttaa
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