Pseudopodoces humilis (Tibetan ground-tit): 102110301
Help
Entry
102110301 CDS
T02921
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102110301 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102110301 (IRF5)
Transcription factors [BR:
phi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102110301 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
102110301
NCBI-ProteinID:
XP_014117409
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MDPPRRVRLKPWLVAQVSSRRFPGLHWLDPERRRFVIPWGHATRNPPGPQDHDTIFKAWA
QETGRFRAGDPPDPPRWKATLRCALNKSREFRLLLDGPRGSPARPFRVYELCEEPPGAAD
GGDEDDNGCSGEEDVSQLNMTSLSIDDTQHGGDLLPPYSWAKEEPPPFASCCPPGGPFGP
PPPALLQGEAGGTRGVPELLPGPLAETGPPLGPPGPSSTCPVAPTEQLIPDLLVSPHMLP
LTDLELKFQYRGRQVCALTVSNPHGCRLFHSSLEPTREQEELFGPLTLEQVPFPAPDAIP
NEKQRFYTHQLLDVLDRGLILELQGQDLFALRLCQCKVFWTGPCAAPRPGPNPIQRERRT
KLFSLEGFLNGLIQFQKGQTPTPPPFEIFLCFGEEWPDRKPKEKKLITVQVVPVAARLLL
EMFSGELSWSADSIPLHISHPDLKDRMVEQFKELHQLWQSHQRLPPAQPLPGPSAGPWAL
PAGPLPH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaccccccccggcgggtgcgcctcaagccctggctggtggcccaggtcagcagccgc
cgcttcccggggctccactggctcgaccccgagcgccgccgcttcgtcatcccctgggga
cacgccaccaggaaccccccgggaccccaggaccacgacaccatcttcaaggcgtgggcg
caggagacgggccggttccgggccggggacccgccggaccccccgcgctggaaggccacc
ctgcgctgcgccctcaacaagagccgcgagttccggctgctgctggacgggccccgcggg
tccccggcccggcccttccgcgtctacgagctctgcgaggagccccccggggccgcagat
gggggggacgaggatgacaatggctgcagcggggaggaagatgtcagccagctcaacatg
acatccctgagcatcgatgacacgcagcacgggggggacctgctgcccccctactcctgg
gccaaggaggagccccccccctttgccagctgctgccccccggggggccccttcgggcct
ccccccccggcgctgctccagggggaggcggggggcacccgcggggtccctgagctgctc
cccggccccctcgctgagacggggccccccctgggccccccgggaccctcgtccacctgc
ccggtggcaccgacagagcagctgatcccagacctgctcgtcagcccccacatgctgcca
ctgactgacctggagctgaagttccagtaccggggccgccaggtctgtgccctgaccgtc
agcaacccccacggctgccggctgttccacagcagcctggagcccacgcgggagcaggag
gagctcttcgggcccctgacgctggagcaggtgcccttccctgctcccgacgccattccc
aacgagaagcagcgcttctacacccaccagctgctggacgtgctggaccgagggctcatc
ctggagctccagggccaggatctcttcgccctccggctctgccagtgcaaggtcttctgg
acggggccctgtgccgctccccggcccggccccaaccccatccagagggagagaaggacc
aagctcttcagcctcgagggcttcctcaacggcctcatccagttccagaaggggcagacc
cccaccccgcccccctttgagatcttcctctgcttcggcgaggagtggccggaccggaag
cccaaggagaagaagctgatcacggtgcaggtggtgccggtggcggcgcggctgctgctg
gagatgttctccggggagctgtcctggtcggccgacagcatcccgctgcacatctcgcac
cccgacctcaaggacaggatggtggagcagttcaaggagctgcaccagctctggcagagc
caccagcggctgccgccggcgcagcccctgcccggcccctccgcagggccctgggcgctg
ccagccgggcccctgccccactga
DBGET
integrated database retrieval system
