Pseudopodoces humilis (Tibetan ground-tit): 102111966
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Entry
102111966 CDS
T02921
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102111966 (OTOF)
Membrane trafficking [BR:
phi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102111966 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
102111966
NCBI-ProteinID:
XP_005533078
LinkDB
All DBs
Position
Unknown
AA seq
2009 aa
AA seq
DB search
MALVLQLRSVSGLRGKGDRIAKAAFRGLSFYTRVLENCEDEARFEETFRWPVASSIDGNE
LLEIQVFNYSKVFSNRLIGTFRMVLQKVVAEGQLEVMDTLIDDNNSAIQTSISIEIRYQA
LDGTVGTWNDKEFLETPSVHSEGDGRYSLETDSLLSGHRHGSDVSPGKSNQQSTERSFRR
AGKGVFSAMKLGKTRPSKDEHRKQDDPAVLETEDLDRKAMRYGAGLEPDTISLASVTAVT
TNVSNKRSKPDIRMEPSAGRPMDYQVSVTIIEARQLVGLNMDPVVCVEVGEEKKYTSMKE
STNCPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGSFKMDVGTVYTQPEH
QFYHKWAILSDPEDLTAGLKGYLKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPDGV
PPERQWARFYIKIYRAEGLPRMNTSIMANVKKALIGENKDLVDPYVQVAFAGQKGKTSIQ
KSSYEPLWNEQIIFTEMFPPLCKRIKVQIRDSDKVNDVAIGTHFIDLRKISNEGDKGFLP
TFGPAWVNMYGSTRNYTLMDEHQELNEGLGEGVSFRARLLLGLAVEILDTTNPEINSSTE
VQVEQATAVADNCSGKMEEFFLFGAFLEATMIDRKIGDKPINFEVTIGNYGNQVDGSSKP
LLRRKKEGGDGDEEESELLQNSSEDEGGEDGELVSVSSSQPMKPLVTDRNYFHLPYLEKK
PCIYIRSWWQDQRRRLYNANIMDKIADKLEEGLNDVQEMIKTEKPHPERRLRGVLEELSS
GCLRFLTLADKDQHHSSRTRLDRERLKSCMRELENMAQQATALRSQVKRNTMKDKLKLVQ
NFLQKLRFLADEPQHTIPDVFIWMMSNNKRIAYARIPSKDILYSIVDEEMGKDCAKVKTV
FLKLPGKRGFGPAGWTVQAKMEIYLWLGLNKQRKDYLSGLPCGFEEKKVPRGQNLPSFPP
ISLLYTKKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFISQSQCTEVLNETLCPTWDQ
LLVFDNVELYGEAHEMRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMSDEQYCPPRF
PPQLEYYQIYRGNATAGDLLAAFELLQIGPGGKSDLPPIDGPTDMDRGPILPVPLGIRPV
LSRYRVEILFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIQNYKKNPNFSTLVKWFE
VDLPENELLHPPLNIRVVDCRAFGRYTLVGSHTVSSLRKFIYRPPDKKAQHWNMAAKHLN
GCLAMTSRAHRSRPTGEIVVNMEPEVPIKKMDTMVKLEANSDAVVKVDVTEEEKEKKKKK
KKGGGGGGGEEVEEEEPDESMLDWWSKYFASIETMKEQLRQQEAAAAEAEEKEETEIGEG
SKAQVKNKDKSKAPKDDKKKKQQPVPELPEKKNKQKIDELKVFNKELEAEFDNFEDWLHT
FNLLRGKIGDNDDNATEEERIVGRFKGSMCVYKVPLPDDITKEAGYDPTFGMFQGIPSND
PINVLVRVYIVRATDLHPADINGKADPYIAIKLGKTDIKDKENYISKQLNPVFGKSFDIE
ATFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGVSQTYSIHGYNTWRD
PMKPSQILSKLCKEGKVDGPHFGPGGRVKVANRVFTGPTEIEDENGQKKPTDEHLALAVL
RHWEDIPRAGCRLVPEHVETRPLLNPDKPGIEQGRLEMWVDMFPMDMPAPGPAIDISPRK
PKKYELRVIVWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGN
FNWRYIFPFDYLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGAIE
LDLNRFPRGAKTSKQCSLEMVTNEAELPMISIFKQKRVKGWWPFVARDENDELEITGKVE
AELHLLTAEEAEKSPAGLARNEPDPLEKPNRPDTSFIWFLNPLKSIKYLICTRYKWLIIK
IVLALLLLIMVALFLYSMPGYMVKKLLGA
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtgctgcagctccgctccgtctccggcctccgcggcaaaggagatcgcatc
gccaaggcggcgttccggggactttccttctacacccgagtgctggaaaactgcgaggac
gaggccaggtttgaggagactttccgctggccggtggcgagcagcatcgacgggaatgag
ctcctggagatccaggtgttcaactacagcaaggtcttctccaacaggctcatcgggacc
ttccggatggtcctgcagaaggtggtggcggaagggcagctggaggtgatggacacgctc
atcgacgacaacaattccgccatccagaccagcatctccatagagatccgctaccaggct
ctggatggcaccgtgggcacctggaatgacaaggaattcctggagacgcccagcgtgcac
tcggaaggggacggaaggtattccttggagaccgacagcctcctgtccggccaccggcat
ggctccgacgtctctcccgggaaatccaaccagcagtccacggagaggagcttcaggaga
gctggaaaaggagttttttcagccatgaagcttgggaagacacgtccgtccaaggatgag
catcggaagcaagacgatccggctgttctggaaacagaagacctggatagaaaggccatg
agatacggagcaggcctggagccagacaccatctccctggcctctgtcaccgctgtcacc
accaatgtctccaacaaaaggtccaagccggacatcaggatggagccgagtgccgggagg
cccatggattaccaggtcagcgtcaccatcatcgaggcccggcagctggtggggctcaac
atggaccccgtggtgtgcgtggaggtgggcgaggagaagaaatacacgtccatgaaggaa
tccaccaactgtccgtactacaacgagtatttcgtcttcgatttccacgtccccccagat
gtcatgttcgacaagatcatcaagctctccgtgatccactccaagaacctcctgcggagc
gggacgttggtggggtccttcaagatggatgttgggactgtttatacccagcctgagcac
cagttctaccacaaatgggccatcctgtccgaccccgaggacctcacggccggcctcaag
ggctacctcaagtgtgacatcgccgtggtgggcaaaggggacaacatcaagaccccgcac
aaggccaacgagacggacgaggatgacatcgaggggaacctcctgctcccggacggggtc
cccccggagcggcagtgggctcggttctacatcaagatctaccgtgccgaggggctgccg
cggatgaacaccagcatcatggccaacgtcaagaaggccctcatcggggagaacaaggac
ctggtggacccctacgtgcaggtggcctttgcggggcagaagggaaagacatccatacaa
aagagcagctacgagcccctctggaatgaacaaatcatcttcacagagatgtttccccca
ctgtgcaaacggatcaaggtccagatccgggactcggacaaggtcaacgacgtggccatc
gggacccatttcatcgatctgaggaagatctccaatgaaggggacaaaggtttcctgccc
accttcggccccgcctgggtgaacatgtacggctccacccggaactacaccctcatggat
gagcaccaggagctcaacgagggcctgggcgagggcgtctccttccgtgcccggctcctg
ctgggcctggccgtggagatcctggacaccaccaaccccgagatcaacagctccacagag
gtgcaggtggagcaggccacggcggtggctgacaactgcagcgggaagatggaggaattc
ttcctcttcggagccttcctggaggccaccatgatcgacaggaagatcggggacaaaccc
attaactttgaggtcaccataggtaactatggcaaccaggtggatggctccagcaaaccc
ctcctgcggaggaagaaggagggaggcgatggggacgaggaggagtcggagctgctccag
aattccagtgaggatgaaggtggtgaggatggagagctggtctctgtttcttcatcccag
cccatgaagcctctggtcacagacaggaattacttccacctgccctacctggagaagaag
ccctgcatctacatccggagctggtggcaggaccagcggcgccggctctacaacgccaac
atcatggacaagatcgcggacaaactggaggaggggctcaacgacgtgcaggagatgatc
aagacagagaaaccgcacccagagcgccggctccgcggggtcctggaggagctgagcagc
ggctgcctgcgcttcctgaccctggctgacaaggaccagcatcactcgtcccgcacaagg
ctggaccgggagaggctcaaatcctgtatgcgggagctggagaacatggcccagcaggcc
acggccctgcgctcccaggtcaagaggaacaccatgaaggacaagctgaagttggtgcag
aacttcctgcagaagctgcggttcctggcggacgagccccagcacacgattcccgacgtt
ttcatctggatgatgagcaacaacaagcgcatcgcctacgcccgcatcccttccaaggac
atcctgtactccatcgtggatgaggagatgggcaaggactgcgccaaagtgaagaccgtt
ttcctcaagctccccgggaagagggggttcggcccggctggatggacagtccaggccaag
atggagatctacctgtggctgggcctcaacaagcagcgcaaggactacctgagcggcctc
ccctgcgggttcgaggagaagaaagtgccccgaggccaaaacctgccctccttcccaccc
atcagcctcctgtacaccaagaaacaggtgttccagctgcgagcccacatgtaccaagcc
aggagtctgtttgcagctgacagcagcggcctctcggatcccttcgcacgggtcttcttc
atctcccagagccagtgcaccgaggttctcaatgagaccctttgcccgacctgggaccag
ctcctggtgttcgacaacgtggagctgtacggggaagctcatgagatgcgggatgacccc
cccatcatcgtcattgagatctacgaccaggacaccgtgggaaaagccgacttcatgggc
cgaacattcgccaagccggtggtgaagatgtcggatgagcagtactgccccccacgcttc
ccgccacagctggaatattaccagatctaccgcggcaatgccacagccggggacctgctg
gccgccttcgagctgctccagatcggccctgggggtaaatcagacctgcccccaatcgat
ggccccacggacatggaccgaggtcccatcctgccggtgcctctgggaattcggccggtg
ctgagcagatacagagtggagatcttgttctggggactcagggacctgaagagagtgaac
ctggcccaggtggaccggccccgcgtggacatcgagtgtgccgggaagggcgtccagtct
gccctgatccagaactacaagaaaaaccccaacttcagcactttggtcaagtggttcgag
gtggacctcccggagaacgagctgctgcacccgcccctgaacatccgcgtggtggactgc
cgagccttcgggcgctacaccctggtgggctcccacaccgtcagctccctccgcaagttc
atctaccgcccgcccgataagaaagcccagcactggaacatggcagccaaacacctcaac
ggctgcctggccatgaccagcagggcccatcgctctcgccccacaggggagatcgttgtc
aacatggagcccgaggttcccatcaagaagatggacacgatggtgaagctggaagctaat
tccgatgcagtggtgaaggtggatgtgaccgaggaggagaaggagaagaagaagaagaag
aagaaaggaggaggaggaggaggtggggaggaagtggaggaggaagaaccggacgagagc
atgttggactggtggtccaagtactttgcctccattgagacgatgaaggagcaactccgg
cagcaggaagcagccgcggccgaggcagaggagaaggaagagacggagattggagagggc
tccaaggctcaggtgaagaacaaggacaagtccaaggcacccaaagacgacaagaaaaag
aagcagcagcctgtccctgagctccctgagaagaagaacaagcagaagatcgatgaactc
aaggtcttcaacaaagagctggaagcagagtttgacaacttcgaggactggctgcacacc
ttcaacctgctccgggggaagattggagacaacgacgacaacgccacggaggaggagcgg
atcgtggggaggttcaaaggctccatgtgcgtctacaaagtgccgctccccgatgacatc
accaaggaggcaggatacgaccccaccttcgggatgttccaggggatccccagcaacgac
cccatcaacgtgctggtccgagtctacatcgtgcgggccacggacctccacccggctgac
atcaacgggaaagccgatccctacatcgccatcaagctgggcaagacggacatcaaggac
aaggagaactacatctccaagcagctgaaccccgtctttgggaaatccttcgacatcgag
gccaccttccccatggagtccatgctgaccgtggccgtgtacgactgggacttggtgggc
actgacgacctcatcggggagaccaagatcgacctggagaatcgcttctacagcaagcac
cgggccacctgcggcgtgtcccagacctactccatccacgggtacaacacctggcgtgac
cccatgaagccctcccaaatcctgtccaagctgtgcaaagagggaaaagtggacgggccg
cacttcgggccagggggaagagtgaaagttgccaacagggtcttcaccggccccacggag
atcgaggatgaaaatggccagaagaagccgacggacgagcacctggcgctggccgtgctg
cggcactgggaggacatcccgcgggccggctgccgccttgtccctgagcacgtggagacg
cggccgctgctcaaccccgacaagccgggcatcgagcagggccgcctggagatgtgggtg
gacatgttccccatggatatgccagcgcccggccctgccattgacatttctcccaggaaa
ccaaagaagtacgagctcagggtgatcgtgtggaacaccgacgaggtcatcctggaggac
gacgactacttcaccggagagaaatccagcgacattttcgtcagggggtggctgaagggg
cagcaggaggacaagcaggacacggatgtccactaccactccctcaccggtgaaggcaac
ttcaactggcgctacatcttccccttcgactacctgatggccgaggagaagatcgtcatc
tccaagaaggagtccatgttctcctgggatgagaccgagtacaagatcccagcccgcctc
accctgcaggtctgggacgccgaccacttctcggccgatgatttcctgggagccatcgag
ctggatctgaaccgcttcccccggggggccaagacgtccaagcagtgcagcctggagatg
gtgaccaacgaggccgagctgcccatgatctccatcttcaagcagaagcgggtcaagggc
tggtggcccttcgtggccagggacgagaacgatgagctggagatcaccggcaaagtcgag
gccgagctgcaccttctgacggcggaggaggccgagaaatccccggctgggctggctcga
aatgagcctgatcccctggagaaacccaaccgcccggacacgtcgttcatctggttcctg
aaccctctcaagtccatcaaatacctcatctgcacccgctacaagtggctcatcatcaag
attgtgctggccctgctgctcctcatcatggtggccctgttcctctacagcatgccggga
tacatggtcaagaagctgctgggagcatga
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integrated database retrieval system
