Pseudopodoces humilis (Tibetan ground-tit): 102112018
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Entry
102112018 CDS
T02921
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102112018 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phi03400
]
102112018 (TDG)
Enzymes [BR:
phi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
102112018 (TDG)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102112018 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
102112018
NCBI-ProteinID:
XP_014112326
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MEGPELGRYYTYLQQAQAFYSLPFHQMMTAVPNMEMMTEQPTLEGIPEPNIAQEPPKEVK
KGGRKRKAKATEPKQPKKPAAKKEKPAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTK
TLPDILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLP
HKYGIGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEV
FGIKVKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
APNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPYDTDQCSLSSN
GTAGSNPQYCEGSSFGEVPNGQWMTQSFADQIPEFNAAVTREEEGSSV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggagggcccggagctgggcagatactacacctatcttcagcaagctcaagcgttttac
tcgcttccgttccatcagatgatgactgcagtgcccaacatggaaatgatgactgagcaa
ccgactctagagggcattccagagccaaacattgctcaggagcctccaaaagaagttaaa
aaagggggaaggaaaagaaaagccaaagcaactgagccaaagcaacccaaaaagcctgct
gctaaaaaagaaaaaccagccaagtcaaaaggcaaacaagaaaagatcacagatactttt
aaagtcaaaagaaaagtggaccgttttaatggtgtatctgaagctgaacttctgaccaag
actttgcctgatattttgacctttgatctggacattgtaataattggcataaaccctggc
ctgatggcagcttacaaaggacatcattacccaggacctggaaaccatttttggaagtgt
ctgttcatgtctggtctaagcaatgaacagttaaaccacatggatgaccacaccttgcca
cataaatatgggattggatttacaaacatggttgaaaggacaacacctggaagcaaagac
ctctccagcaaagagtttcgggaaggagggcgaattctgatgcagaagctacaaaagtat
aagcctcgcatagcagcttttaatggaaaatgtatttatgaaatttttagtaaagaagtt
tttggaattaaagttaagaacttggaatttgggctgcagccacacaaagtgccagataca
gaaactctgtgctacgttatgccttcatccagtgcaagatgcgctcagtttcctcgggca
caagataaagttcattattacattaaactgaaagacttaagggatcaactgaaaggcatt
gcacccaacacagacgtccaggaggtgcagtacacatttgacttgcaacttgcacaagag
gatgctaaaaagatggctgtcaaagaagaaaagtatgacccgggctatgaagcagcatac
ggaggagcttactgtgaccgtgcaccatacgacactgaccagtgcagcttgtcttcaaat
ggaactgcaggaagcaacccacagtactgcgaagggtcgtcctttggtgaagttcctaac
ggacagtggatgacacagtcctttgcagaccagattccagagttcaatgctgccgtgaca
cgggaagaggagggaagcagcgtgtag
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