Pseudopodoces humilis (Tibetan ground-tit): 102114113
Help
Entry
102114113 CDS
T02921
Symbol
SMCR8
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8 protein
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102114113 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102114113 (SMCR8)
Membrane trafficking [BR:
phi04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
102114113 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
102114113
NCBI-ProteinID:
XP_005523121
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MISAPDVVAFTREEELEDDLYREPPLPEEYSVPLFPFTGQGANPWAKVAGSKFTRDFILI
SEFSEQVGPQPLLTIPDDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSTEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEQQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLRQIRSYPYRKLKDSEFHPYEPECALDRADVGSDQDPTASDPAEPGETALY
THVPSYTPKLIKAKSAKCFDKKLKTLEELCDVYFFTQTLDQLHHIERTFRGDVCYLLTEQ
ISRALLKQQSVTNFLFEDVSFLDEKPPEKQYRGCQGLGQDATDEKCSEESLAPKVVISLG
SYKSSVECVPIKMEQEIEDSEGPKMSESMMSEHQENLDYLDADIKGSISSGESIEVLGTE
KSGSGLTKSESQASLPVIPSPQAGRSKVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYP
SAINEEPHADDDEGGLRFTPRLNPGIDDGQDDISKQESLVQVDAACCIGKESPNFLEPLP
ELGQKPCEEDGVVRIPPQPYRPAEQGLRGGFPCHDGLSGGLLPYELDSRYLTGSREVSKS
SLDECSDSTSYISSAASTCSDRTPSPAHLGCAAGERHRKKAGQNALRFIRQYPFAHPAIY
SLLSGRTLVVLGEDEAMVKRLVTALSIFVPSCGAYAKPVKHWVTSALHLVDFQKWKLVGL
QRAVSPAGVNVLHALSRYSRYLSILDADSKTLRCPLYKGTVVARLADHRTQIKRGSTYYM
HVQSILTQLCSKAFLFTFCHHLHLPISEREPEESVVNRRMNFLKLQLGLANEDIKIVQYL
AELLKLHYIQEPGQGGNPLLRFDYVPSFLYKI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccagggaggaggagctggaggatgatctg
taccgcgagccgcccctgcccgaggagtactcggtgccgctgttccccttcaccggccag
ggcgccaacccctgggccaaggtcgccggctccaagttcacccgggacttcatcctcatc
tccgagttctcggagcaagtggggccccagcccctcctgaccatccccgatgacgccaaa
gtgtcgggcaccttcgatctcaattatttttccctgcggatcatgtctgtggattatcag
gcatcctttgtggggcaccctcctggctctgcctacccgaagttgaactttgtggaggat
tccaaggtggtgctgggggactccaaggaaggggcctttgcctacgtgcaccacctgacc
ctgtacgacctggaggccaggggctttgtcaggcccttctgcatggcttacatttctgct
gacgagcacaaaatcatgcagcagtttcaggaactctccaccgagttctccaaagcctcc
gaatgcctgaagacggggaaccggaaagcttttgccaatgaactggaaaagaaactgaaa
gaccttgactacaccaggaccgtcctgcacaacgagactgagcaacagaagaaagccaac
gacaaagggtattacacgacccaggccattgagaaggccaatgagctggccagtgtggaa
aagtcaatcatcgagcaccaagacctgctgaggcaaatccggtcgtatccctacaggaag
ctgaaggactctgaattccacccctacgagccagagtgtgccctggaccgggctgacgtg
ggcagcgaccaagacccgactgcctctgaccctgctgagcctggtgaaactgctctttac
acccatgtgccatcctacacccccaaactcatcaaagccaagtctgccaagtgctttgac
aagaagctgaagacactggaggaactctgtgatgtttattttttcacccagacccttgac
cagttgcaccatatcgagaggacttttcgaggtgatgtgtgttacctcttgacagagcag
ataagccgggctctcctaaagcaacagagtgtcaccaacttcctctttgaggatgtgtct
ttcctggatgaaaaacctcctgaaaagcagtacagaggctgccaggggctcggccaagat
gccacagatgaaaagtgttcggaagagtcccttgctcctaaagtggtcatcagcctgggc
tcctacaagtccagtgtggagtgcgtgcccatcaagatggagcaggaaattgaggactct
gaaggacccaaaatgtctgagtccatgatgtctgagcaccaggagaacctggactatctg
gatgcagatatcaaaggcagcatcagtagcggggagagcatcgaggtgcttggaacggag
aaatcaggatctgggctgacaaaatcggagagccaggccagcctgcccgtcattcccagc
ccccaggccggccggagcaaggtgggcagccggcgcacggtcagcgaggacagcatcgag
gtgctcagcacgtgtccctccgagtccctcatcccagaggatttcaaagcgagctaccca
agtgccattaacgaggagccccacgcggatgacgatgagggaggccttcgcttcaccccc
agactgaacccgggcatcgatgatgggcaggatgacatctcaaagcaggaaagcttagtg
caggtggatgctgcctgttgtatcgggaaggagagccccaacttcctggagccgctgccc
gagctggggcagaagccgtgcgaggaggacggggtggtgcggatccccccgcagccgtac
cggccggccgagcaggggctgcgcgggggcttcccctgccacgacggcctctcggggggg
ctcctgccctacgagctcgattcgcgctacctgacgggcagcagggaggtgagtaagagc
agcctggacgagtgctcggactccacgagctacatcagcagcgccgcctccacgtgctcc
gacaggaccccctctcccgcccacctgggctgcgcggccggggaaaggcacaggaagaag
gccgggcagaacgcgctgcgcttcatccgccagtaccccttcgcccaccccgccatctac
tccctgctcagcgggaggaccctggtagtgctgggggaggacgaggccatggtcaagagg
ctcgtgacggcgctctccatcttcgtgcccagctgcggcgcgtacgccaagcccgtgaag
cactgggtcacttctgctctgcacttggtggatttccagaagtggaagttggttggactc
cagagggcagtgtcccctgctggggtgaatgtgctgcacgccctgagccgctacagccgc
tacctgagcatcctggacgccgacagcaagaccctgcgctgccccctctacaagggcacc
gtggtggcccggctggccgaccaccgcacgcagatcaagcgtggcagcacctactacatg
cacgtccaaagcatcctcacccagctgtgctctaaagccttcctcttcaccttctgccat
catttgcaccttcccatcagcgaaagggaaccggaggaatccgttgtgaatcgcaggatg
aacttcctaaagcttcaactgggccttgccaacgaagatatcaaaatcgtgcagtacttg
gccgagctgctgaagctgcactacattcaggaaccggggcagggggggaaccccctgctc
agatttgactatgttcccagctttttgtacaaaatctag
DBGET
integrated database retrieval system
