Pseudopodoces humilis (Tibetan ground-tit): 102114250
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Entry
102114250 CDS
T02921
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102114250 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102114250 (KDM2A)
04121 Ubiquitin system [BR:
phi04121
]
102114250 (KDM2A)
03036 Chromosome and associated proteins [BR:
phi03036
]
102114250 (KDM2A)
Enzymes [BR:
phi01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
102114250 (KDM2A)
Transcription factors [BR:
phi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102114250 (KDM2A)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102114250 (KDM2A)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102114250 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102114250 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Ribosomal_60s
LRR_4
Motif
Other DBs
NCBI-GeneID:
102114250
NCBI-ProteinID:
XP_005528998
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRNSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEEEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEDDE
DAAGKESRRPMTRRSILTSPIANGANVDYDELSKSCRSSLPGLKKTPSIDSSDSSRGSQN
GQAWDPSGGSPRKSRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKL
LLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPAPRPTPVRS
TVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLP
HSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKC
YQGDDAEKGQKRKVEESDDDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRGV
VTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKLH
GSYLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHSPRVVVRHAPARMPLRSGGDEEAA
AEEEEEEEEEEEENAEEGGAARLNGRGGRAQEGEESCVQREVWMSVFRYLTRRELCECMR
VCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNR
LPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNR
SKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNS
LTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDE
KLIQKIS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggac
gacgacagcagtcctggcgtgtccttctcactctcttcagaggagtcggagatggagcct
gaggaagaacggatccgttacagccaaagactgcgtggcacgatgaggcgacgttacgag
gacgatggcatctccgacgatgagattgaagggaagaggacgtttgaccttgaggaaaag
ctgtccaccaacaaattcaactccacttttgtggtcttcatggaaggcaaagacttcaca
gttgagtacatccagcgaggtggcctgagggacccactcatcttcaggaactcggatggc
ctggggataaagatgccggatccagacttcagcgtgaacgatgtgcggctgtgtgtgggg
agccgacggatggtggatgtgatggacgtgaacacgcagcgagacatcgagatgtccatg
gcgcagtgggcgcgctactacgaaacaccagaggaggagcgggagaagctctacaatgtc
atcagcctggagttcagccacaccaaactggagaatctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccaggcacctgaaggaaagtcagacagag
tctaccaatgccatcctggagatgcagtatccaaaggtgcagaaatactgtttgatgagc
gtcaagggctgctatacagatttccacgtggactttggtggcacatctgtgtggtaccac
atccaccgagggggaaagatcttctggctgatccctcccacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacatcttccttggggacagagtgtca
gagtgccagcgcatcgagctcaagcagggctacacatttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacgctggtttttgggggcaacttcttacacagcttc
aacatccctatgcagctccggatctacagcattgaggatcgcacacgggtcccaaataaa
tttcgttatcccttctattacgagatgtgttggtatgtgctggagcgctacgtgtactgc
atcaccagccgctcccacctgaccaaggacttccagaaggaatccctgagcatggatatg
gagctgagctcctcagactctgtgaacatggaagaggaggaggaagaggaggatgatgag
gatgcagcagggaaggaatcccggcgccccatgaccaggaggtccattctcaccagcccc
atcgccaatggtgccaatgtggactatgacgaactgagcaagagctgccggagcagcctg
ccaggtctcaagaagaccccatccatagactcttctgactccagccggggctcccaaaat
ggccaggcgtgggacccgagtgggggcagcccccggaagagcaggaaggtgcacctgacc
cagtttgagctggaggggctgcgctgcctcgtggacaagctggagtcactccctctgcac
aagaagtgtgttcccaccggcatcgaggatgaggacgccctcatcgctgacgtcaagctg
ctgttggaagaatacgcaaacagcgatcccaaactggcacttacaggcgtccccatcgtc
cagtggcccaagagagataagctaaagctccaggcccggctgcgggtgcgcctgcccacc
atccccatcaccaagccgcacaccatgaagccagcaccacgcccaactcccgtcaggtcc
acggtgtctcccatcgtgtcgggtgcccggcggaggcgggtgcggtgccggaaatgcaag
gcctgcatgcagggcgagtgtggcatgtgccactactgcagggacatgaagaagtttggc
gggcctggccgcatgaagcagtcttgtgtcctccggcagtgcttggcgcccaggctgcct
cactcggtcacgtgtgcactttgtggggaggtggatcagaatgaggactcgcaggacttt
gagaagaagctcatggagtgctgtatctgcaatgagatcgttcaccctggctgtctgcag
atggatggggaaggactgctcaatgacgagctccccaactgctgggagtgccctaagtgc
taccagggtgacgatgcagagaagggccagaagcgtaaggtggaggagagcgacgacgac
acggcgcaagccaaggtgctgcggcccctgcggagctgcgaggagcccctgacccccccg
cccaactcgcccaccccgatgctgcagctgatccacgaccccgcgtccccccgcggggtg
gtgacacgctcgtccccgggggccgggcccagcgaccaccacagcgccagccgggacgag
cgtttcaagcgccggcagctgctgcggctccaggccacggagagaaccatggtgcgggag
aaggagaacaaccccagtggcaagaaggagctgtcagaggtggagaaggccaagctgcac
ggttcctacctcaccgtgacgctccagcgccccaccaaagatgtccacggcacttcgatc
gtccccaagctccaagccatcacggcctcctcggccaacctgcagcactcgccgcgcgtg
gtcgtgcgccacgcgcccgccaggatgcccctgcggagcgggggcgacgaggaggcggcc
gctgaggaagaggaggaggaagaggaggaggaggaggagaatgcggaggaggggggggcg
gcccggctgaacgggcgcgggggccgggcgcaggagggcgaggagagctgtgtccagcgt
gaggtctggatgtccgtgttccgctacctcacccgcagggagctctgcgagtgcatgcgg
gtgtgcaagacctggtacaagtggtgctgtgacaagagattgtggacaaagatagacttg
agcaggtgcaagtccatcaccccccaggcgctgagcggcataatcaaaaggcagccggtc
agcctcgacctcagctggaccaatatctcaaaaaaacagcttacgtggctcgtcaacagg
ctgccaggcctgaaagacctcatcctagcgggctgttcctggtctgcggtctgtgctctc
agtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatcaag
gaccctcagatccgggacttactcacacctccaacagacaaacccagtcaggacaatcgc
agcaaactccgcaacatgatcgacttccggctcgccgggctggacatcacggacgccacg
ctgcgcctgatcatccgccatatgcccctgctctcccgcctcgacctcagccactgcaac
cacctcacggaccagtcggccaacctcctcaccgccgtgggctcctccacacgcaactcc
ctcaccgagctcaacatggcaggctgcaataagctgacggaccaggccttgctctacctg
cgccgcatctccaacgtcaccctcatcgacctgcggggttgcaagcagatcacccgcaaa
gcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctgtccgatgag
aagttgatccaaaaaatcagctag
DBGET
integrated database retrieval system
