Pelagibacterium halotolerans: KKY_2004
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Entry
KKY_2004 CDS
T01645
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
phl
Pelagibacterium halotolerans
Pathway
phl00300
Lysine biosynthesis
phl00550
Peptidoglycan biosynthesis
phl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KKY_2004
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KKY_2004
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phl01011
]
KKY_2004
Enzymes [BR:
phl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KKY_2004
Peptidoglycan biosynthesis and degradation proteins [BR:
phl01011
]
Precursor biosynthesis
Amino acid ligase
KKY_2004
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AEQ52014
UniProt:
G4RG00
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All DBs
Position
complement(1983901..1985292)
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AA seq
463 aa
AA seq
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MPDIEIGGLNADSRLIGQGDVFFALPGTRGHGNVYAQDAVGRGAVAIVTDEALKGDPGVP
VVIVEDVRAAYAIAAANFCGPQPAICAAVTGTNGKTSVVSFLRQIWAYAGIRGASLGTLG
LMVGDEHVPGELTTPDSLSLHKTLAKLKADGVDHVALEASSHGIDQRRLDGVKFTAVAFT
NLSRDHLDYHETIEAYRDAKLRLFRELIDGDATAVVDAENEEGMPFMFAALDKGATVFTV
GEGGAHIDIESVESEGFGQRVKGKLVGEPMEFLLPLVGRFQVDNAVVAAGLAMATGVANG
DAIAALETLEGAKGRLENVAQRGEAAVFVDYAHTPDALENALAALRPFAKGRLIVVFGCG
GDRDPGKRPQMGEVAERLADRVIVTDDNPRTENAAAIRAQIVAGAPGAAEIADRAEAIGH
AIAEMGAEDVLLVAGKGHEDYQIVGKTKHHFSDHEVVRAAFGA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacatcgaaatcggcgggctcaacgccgacagccggttgatcgggcagggtgac
gtgttctttgcgctgccaggcacgcgcgggcatggaaatgtctatgcccaggatgcggtt
ggccggggcgctgtggcaatcgtcaccgacgaggcattgaagggcgatccgggcgttccc
gtcgtcattgtcgaggacgtgcgggccgcctatgcaattgcggccgcaaatttctgcgga
ccgcagccggcgatctgcgctgcggtgaccggcacgaacggcaagacgtcggttgtctcc
tttctgcgtcagatctgggcctatgccggcataaggggcgcaagtctgggcactttgggg
ttgatggtgggcgacgagcacgttccgggcgagttgaccacaccggactcgctgtcgctg
cacaaaaccctcgcaaaactcaaggcggacggcgttgaccatgtcgcactcgaggcctcc
agccatggcatcgaccagcgccggctcgacggggtgaaatttactgccgttgcctttacc
aatctcagccgcgatcatctcgattatcacgagaccatcgaagcctaccgcgacgccaag
ctgaggctgttccgcgagttgatcgatggcgatgcgacagccgtcgtcgatgcggagaac
gaggagggaatgcccttcatgttcgcggcgctcgacaagggcgcgacggtgttcaccgtc
ggggaaggcggagcgcatatcgacatcgaaagtgtcgaaagcgaggggttcgggcagcgg
gtcaagggcaagctggtgggcgagcccatggagttccttttgccgcttgtggggcggttt
caggtggacaatgccgtggtcgctgcgggattggccatggcgacgggggtggccaatggg
gatgccattgctgcgctggagacgctcgaaggggccaaggggcgattggagaatgtcgcc
cagcgcggcgaggcggccgtgttcgtggactatgcccatacgcccgatgctctcgaaaat
gcgcttgcggcgcttcgcccctttgcgaagggacgactgatcgtggtgttcgggtgcggc
ggggaccgcgatcccggaaagcgtcctcaaatgggtgaagtggccgaaaggctggccgat
cgggtgatcgtcaccgacgacaatccgcgcaccgagaatgcggcagcgatccgcgcgcag
atcgtggctggggcgccgggcgcagccgaaattgccgatcgggcggaagcgatcggtcat
gcaattgccgaaatgggggcagaggacgttttgctcgttgctggcaaggggcatgaggac
tatcagatcgtgggcaagaccaagcaccatttttccgaccatgaggtcgtgcgcgcggcc
tttggggcctga
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