Phormidium sp. PBR-2020: JWS08_09325
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Entry
JWS08_09325 CDS
T07578
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor01501
beta-Lactam resistance
phor01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWS08_09325
01503 Cationic antimicrobial peptide (CAMP) resistance
JWS08_09325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phor03036
]
JWS08_09325
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phor02000
]
JWS08_09325
01504 Antimicrobial resistance genes [BR:
phor01504
]
JWS08_09325
Chromosome and associated proteins [BR:
phor03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JWS08_09325
Transporters [BR:
phor02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JWS08_09325
Antimicrobial resistance genes [BR:
phor01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWS08_09325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
DUF4407
DUF745
Motif
Other DBs
NCBI-ProteinID:
UCJ13901
LinkDB
All DBs
Position
complement(2168948..2170231)
Genome browser
AA seq
427 aa
AA seq
DB search
MKRPKPWLMGILIGSLWLTMGCSPNEGETAQAQSSRRGGSREEGDRTVTVDVAIAEAQTR
GRELNYSGSTQPLRRVSLRARSDGQLLTLNADVGDPVFQGQVIARVEDTLLLSELAGVEA
DVSVRQSEVEEARNQRIEAEFRVEELRAELEQAVVDSRRLKNLAGEGAVPRREAELAQTR
VRTLEQQLRSAQEQVRIRDRAITSAQQRVGAQEAIVDGVRQRLSYTDVPSPLNAVVLERL
LEPGDIVQSGDVILELGDFSQVEIRIEIPDRDRSQISLGQAVDVVLDAFPNQEFVGRVSR
IFPNADPVARLIPVQITLQNPQVPDGQLGGGLLARVTLNTSSQQVVTIPERALDVSAQGN
DTIFVVEGNESETTVSARRVELGEREDDEVEILEGLAPGEQFIVRSDRPLQDGQTVRRSF
LSNNRSD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaccaaaaccttggctaatgggaattcttatcggtagcctttggttaaccatg
ggatgcagtcccaatgagggagagaccgcccaggcgcaatcctcccgacgaggtggctcg
cgagaggagggcgatcgcaccgtcaccgttgacgtggctattgccgaagcccaaactcgg
ggccgggaactcaactatagtggcagcacccaacccctgcgccgggtttccctgcgggcc
cgcagcgatggtcaactcctaaccctcaatgccgacgtgggagatcccgtctttcaggga
caagtcatcgctcgggttgaagataccctactgctgtcggaactagcgggagtcgaagcc
gacgtgagtgtgcgccaatcagaagtcgaggaagcccgtaaccagcgcattgaagccgaa
tttcgggttgaggaactgcgagccgaactcgagcaggccgttgtggactcccgtcgtctc
aaaaacctagccggagaaggagccgttccccgtcgtgaagccgaactcgcccaaacccgt
gtccgcacccttgaacaacaactgcgatcggcccaagaacaagtccgtatccgcgatcgc
gccatcacctccgcccaacaacgggtaggggcccaagaagccatcgtcgatggagtccgc
caacgactctcttatacggatgttccctctcccctcaatgccgtcgttttagaacgactc
ctagaacccggagatatcgtacaaagcggagatgtaattttagaactcggggactttagc
caagtcgaaatcagaatcgagattcccgatcgcgatcgcagtcaaatctccctcggccaa
gccgttgacgttgtcctcgatgcctttcccaatcaagagtttgtcggacgagtctcgcgc
atctttcccaacgccgatcctgtcgcccgactcattcccgtccaaattaccctacagaac
ccccaagtcccagacggacaactcggaggcggtttactggcccgagttaccctaaacacc
tcctcacaacaagtggtgaccattcccgaacgggccctagacgtgtccgcccaaggcaat
gacacgatatttgtagtggaagggaacgagagcgaaaccaccgtcagcgcccgtcgtgta
gaactcggagaacgagaagatgacgaagtagaaattctcgaaggactggcccccggcgaa
caattcatcgtccgcagcgatcgccctctccaagacggccaaaccgtccgccgcagtttc
ctctccaacaatcgcagcgactag
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