Phormidium sp. PBR-2020: JWS08_15315
Help
Entry
JWS08_15315 CDS
T07578
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor01501
beta-Lactam resistance
phor01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWS08_15315
01503 Cationic antimicrobial peptide (CAMP) resistance
JWS08_15315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phor03036
]
JWS08_15315
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phor02000
]
JWS08_15315
01504 Antimicrobial resistance genes [BR:
phor01504
]
JWS08_15315
Chromosome and associated proteins [BR:
phor03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JWS08_15315
Transporters [BR:
phor02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JWS08_15315
Antimicrobial resistance genes [BR:
phor01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWS08_15315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Tropomyosin
FliJ
OEP
AAA_13
Fez1
MAD
CCDC93_CC
Motif
Other DBs
NCBI-ProteinID:
UCJ11150
LinkDB
All DBs
Position
3483579..3485183
Genome browser
AA seq
534 aa
AA seq
DB search
MKPLSYDIDHNQRANPNSSVPPTPEESAPAIPDEEFPPESEPPAPRGINWKSILIGLGLG
IVLAGIGGRLFSESSPETPAADTEETERNPSQTVTAITVGEQAVNRTLNASGSVNAYDLL
PILPRATGLQILDVRVREGDIVGAGEVLAVLDDSVLQSQLSGALSQIDSARSSVSAAQAD
ISQAESSRRQAEADLERARTGIRQAESRVAQAEASLTRNRARVTQAQASLEQSEREYQRY
QQLANEGAISRQEVELRERDVRTAREDVNQAVEEVRVAEAELDSARADVLNAEANVQSAQ
ATVESTLAGIEAAQAGVANAQSGVQNQDAVVQELETRLNQTLVVAPQGGIIAERQARVGD
VSGNNPLFTLIAQGQLELQLQVPETQLPLIRPGAPVRVRSDADSRIDVRGRVREILPTIN
PETRQATVVVDLPSDDSLRPGMFLEGEIVTETLDSLTIPSAAVLPQADGSAQVFRLNPDD
TVTATRIELGEVVDAQDESEESQVEVLSGLNAGDRIVVSGAGFLSDGDLVRVVD
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacccttgagttacgacatcgaccacaaccaacgcgcaaatcccaactccagcgtt
ccgccaacgccggaagagtccgcccctgccattcccgatgaggaatttcccccagaatcc
gagcctcccgcccccagaggcatcaactggaaatccatcctcatcggattgggcctaggc
attgtcttagccggaataggtggacgactctttagcgaatcctccccggagactcccgcc
gccgacaccgaggaaaccgagcgcaatcccagtcaaaccgtcaccgccattaccgtcggg
gaacaagcggtcaatcgcaccctcaacgccagtggcagcgtcaacgcctatgacttactc
cccatcctccctcgcgccaccggcctacaaatcctcgatgtgcgagtccgtgaaggggat
atcgtcggggctggggaagtcctagcggttctcgatgactccgtgcttcagtcgcaactg
tccggggccttatcccaaattgactcagcccgctcatcggtgagtgcggcccaagccgat
atctcccaagccgaatccagtcgccgtcaagccgaagccgacctagaacgcgctcgcacc
gggattcgccaagctgaaagccgcgtcgcgcaagctgaggccagcctcacccgtaatcgg
gcccgcgtcacccaagctcaagccagtttagaacagtcggaacgggagtatcaacgctat
cagcaactggccaacgaaggggctatcagtcgccaggaagtagaactacgagaacgggat
gtgcggacggctcgtgaggatgtcaaccaagcagtcgaagaggtgcgagtggcggaggca
gaattagacagcgcccgcgctgatgtcctcaacgccgaagcgaatgtgcaaagtgcccaa
gccaccgtagaaagcaccctagccggcattgaagcggctcaagcgggggtcgccaatgct
caatcaggagtccagaatcaagatgccgtggtgcaggagttggaaactcgccttaatcaa
accctggtggttgccccccaaggggggattattgccgaacgtcaggcgcgagtcggagac
gtgagtggcaacaatcctctctttactctgattgctcaaggacagttggagttacagtta
caagttcccgaaacccagttacccctaattcgtcctggcgctccggtccgagttcgctcc
gatgccgactctcgcatcgatgttcggggacgagtccgagaaattctgcctaccataaat
cccgaaactcgtcaagccaccgtcgtcgtagatttacccagtgacgacagtttacgcccg
gggatgttcctagagggcgaaattgtcaccgaaaccctggatagcttaaccattccctca
gcggcggttctgccccaagccgacggtagcgcccaagtcttccgcctcaaccccgacgat
accgtcaccgccacccgcattgagttaggggaggtcgtagatgctcaagatgagtcggag
gagtcccaagtggaagttctcagcggcttaaatgcgggcgatcgcatcgtcgtctcaggg
gccggattcctcagcgacggcgatctcgtccgagtcgtcgactaa
DBGET
integrated database retrieval system
