Phormidium sp. PBR-2020: JWS08_15320
Help
Entry
JWS08_15320 CDS
T07578
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor01501
beta-Lactam resistance
phor01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWS08_15320
01503 Cationic antimicrobial peptide (CAMP) resistance
JWS08_15320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phor02000
]
JWS08_15320
01504 Antimicrobial resistance genes [BR:
phor01504
]
JWS08_15320
Transporters [BR:
phor02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JWS08_15320
Antimicrobial resistance genes [BR:
phor01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWS08_15320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
ScsC_N
Motif
Other DBs
NCBI-ProteinID:
UCJ11151
LinkDB
All DBs
Position
3485257..3488367
Genome browser
AA seq
1036 aa
AA seq
DB search
MSFSTWSVKRPVPTLVLFIILTFVGLTSFFQLGIDNTPNIDVPVVQVTVTQPGAGPSELE
SQVTQPIEDAVAGLGNIDELQSTVNDGVSVTTINFVLGTDTDRVTNDVRNAVSQIRQELP
QDINEPIIERLEFAGGAIMGYAVRSNQRSIEELSQLVDRQISSALLQVPGVAQINRTGGV
DREIRVQLNPQRLKALGITATQVNDQIRALNLNLSGGRSEAGGLEQSIRTLGSAPTVNDL
QRYRISLPNGESVPLSSLGTVEDSFGDRRQQAQLITREGTEEVVSFQVLRSSGSSVVPVE
EGVRERVAELEAGILPDDIEFQLLFTRANEIRDSYQASIDALIFGCLLTTLTVGFFLRDW
RATLITGVALPLSIVPTFMVMQLLDYTLNGMTLLALSLAVGNLVDDAICMIENIDTHLSM
GKRPFQAALDAANEIGLAVVATTATIVAVFLPVAFMGGIPGQFFQPFGVTVAVSTMFSTL
VATTMTPMLSAYLLKPKPQAEETSNLLNPSPKPGPYRRVLTWALRNRITTLLIAIAFFIG
SLQLVPYIPQGLFTDGDQGISTVNVELPPGARLRDTLAVSDRLSDVLLDHPATENVFVSA
GSGGSTGSVNQATVRAILKPTDERDVNQQEFEQEIRPRLAEIPGARLSFQSAGAGGGGKD
LSIVLSSENPEVLLDTATALEQQMRGIPGLVEIASSASLVQPELLIQPDSERAADLGVSV
QAIARTANLATLGDVEANLAKFDLPDRQIVIRVQIAEQYRNSLQTLRNLEIPSQSGALVP
LSSVARIRLGSGPAQIDRFDRARQIAVEANLEGISLGDALAAVRELPAMNPLPPGVFEQP
SGDAKIMVDIFTRFLGALAFAILCIYAILVLLYNNFLYPLTILVALPLSVGGALLALLIT
QKELGLFALIGIVLLMGLVTKNAILLVDCTLANQEQEIPQFKAIVEAGVSRLRPIFMTAI
STVAGMMPIALELGAGGEVRSPMAIAVIGGFSTSTMLTLLVVPVLFTYVDNLNRAFREIL
SSGFGGFRLPRLLGRS
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctcaacctggtccgtcaaacgccctgttcccaccctcgtcttgtttattatc
ctgacctttgtgggactgacctcatttttccaactggggattgataatacccccaacatt
gatgttccggtggtgcaagtcacggtcactcaacccggtgctggcccctcggagttggag
tctcaggtgacgcagccgattgaggatgccgtcgccggcttggggaatatcgatgagttg
caatcgaccgtcaatgatggggtgtcggtgacgaccattaactttgtcttgggaaccgac
accgatcgcgtcaccaatgatgtacgcaatgcggtgtcacaaattcgccaggaactcccc
caggatatcaatgaaccgattatcgagcggttggagtttgccgggggcgcgattatgggt
tacgcggtgcggtccaatcagcgcagtattgaggaactcagccaactggtcgatcgccag
attagtagtgccctattgcaagttccgggggtggcacaaatcaaccgcacggggggagtt
gaccgagagattcgggtgcaactgaacccgcaacgcctcaaagccttgggtattaccgcc
actcaggtcaatgaccagattcgcgccttgaatctgaacctctctggggggcgatcggaa
gcgggaggcctcgaacaaagtattcgcaccctgggcagcgccccaacggtgaatgactta
caacgctatcgcattagcctaccgaatggggagtcggttcccttgtccagtttaggaacc
gttgaagatagtttcggcgatcgccgtcaacaggcgcaactcatcacccgagagggaacg
gaagaggtggtctccttccaggtgttgcgcagtagcgggtccagtgtagttcccgtagaa
gagggggttcgcgaacgggtggcagagttagaagctggcattctccccgatgatattgag
tttcaactgctgtttacccgcgccaacgagattcgcgactcctaccaggcctccattgat
gccttaatcttcggctgtctactcaccactctcaccgtgggctttttcctgcgggattgg
cgagcgacgttgattacaggggtggcgttacccctgtccattgtccccacctttatggtg
atgcaactgttggactacaccctcaatggcatgaccttgttggctttgtccctcgcggtg
gggaacttggtggatgatgccatctgtatgattgagaacattgatacccatttaagtatg
ggtaaacgcccctttcaagcggcgttagatgccgccaatgagattggtctagcggtggtg
gcgacaacggcgaccattgtggcggtgttcctccccgtggcctttatgggggggattccg
ggacagtttttccaaccctttggggtgacggtggcggtgtctaccatgttctcaactttg
gtggccacgaccatgacccctatgttgtccgcctatttactgaaacccaaaccccaagcg
gaggagacctccaatctcctcaatccctcccccaagccggggccctatcgtcgtgtcttg
acctgggccttgcgtaatcgtattaccacgcttttgattgcgatcgccttctttattggc
agtctgcaactggttccctacattccccaggggctgtttaccgatggtgatcaggggatt
agtaccgtcaacgtagaattaccgcccggcgctcggttacgggataccctcgcggtgagc
gatcgcctcagtgatgtcttactcgaccatccggccaccgagaatgtgtttgtctccgcc
ggaagtggcggctcgacagggtctgtgaatcaggccacggtgcgcgccattctcaaaccc
acggacgagcgggatgtgaatcaacaggagtttgaacaggaaattcgccctcgactggct
gagattcctggagcgcgtttgagcttccagtcagcgggggctggcgggggtggaaaagac
ctctccatcgtcctcagtagtgaaaatcctgaagtgctgctcgacaccgccacggctttg
gaacagcaaatgcggggcatccccggtttagtggaaatcgcctccagtgccagtttggtg
cagccggaattgttaattcaaccggatagtgaacgggcggcggatttgggcgtctcggtt
caggcgatcgcccgtacggctaatctagccaccttaggggatgtggaggcgaatttagcc
aaatttgacctccccgaccgacagattgtcattcgcgtgcaaattgccgaacagtatcgc
aatagcctacaaacgctacggaatttagagattcccagtcaatcgggggcgttagtccct
ctctcctcagtggcgcggattcgtcttggtagtggtccagcacaaattgaccgttttgac
cgcgcccgtcagattgccgtagaagcgaacctagaggggatttctttaggggatgctctt
gcagccgtgcgggaactcccagcgatgaatcctctgccacctggggtttttgaacagccc
tccggcgacgccaaaatcatggtagatatcttcactcgttttttaggtgctttggcattt
gcgattctttgtatctatgccattttggtgctgttgtataacaatttcctctatccgtta
acgattctggtagcgctgccgttgtctgtgggtggggcattgttagcactgttaattact
cagaaggagttaggattgtttgccctcattggcatcgttttgctgatgggattagtcact
aaaaatgccattttgttagtggattgtaccctggccaatcaagagcaggagattccccaa
tttaaggccatcgtggaagccggagtttctcgattgcgtccgattttcatgactgcgatt
tccactgtagccgggatgatgcccattgccttagagttaggggctgggggtgaagtgcgt
tcccccatggcgatcgccgtcattggcggcttctcgacctccaccatgttgacgttgttg
gtggttccggtgttgtttacctatgtggacaatctcaaccgtgcctttagggagatattg
agcagtggtttcgggggcttcagactaccgaggctgttggggcgatcgtag
DBGET
integrated database retrieval system
