Phormidium sp. PBR-2020: JWS08_19625
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Entry
JWS08_19625 CDS
T07578
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor01501
beta-Lactam resistance
phor01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWS08_19625
01503 Cationic antimicrobial peptide (CAMP) resistance
JWS08_19625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phor02000
]
JWS08_19625
01504 Antimicrobial resistance genes [BR:
phor01504
]
JWS08_19625
Transporters [BR:
phor02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JWS08_19625
Antimicrobial resistance genes [BR:
phor01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWS08_19625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UCJ11904
LinkDB
All DBs
Position
complement(4509287..4512382)
Genome browser
AA seq
1031 aa
AA seq
DB search
MFYQFFIKRPVFASVCSLLLMLVGLVGYGSLPVQELPSIDPPVVSVTTTYPGANPSVVET
EVTEILEAELNGVEGVRTLTSESREGVSSITVQFQLDQDIDIGAQEVQRSISQVLGQLPD
DVDSPVIRRESGDAAPIIWFSIYGDNNSVSTLELSDYADRVLVDALESVNGVSSIFVGGE
RRYAMRLWIDPQRLSARNLTILDVENVLRQENIELPSGRLEGERSEFSVRTLGRLQEPEE
YEALVLRTTSDGTQIRFSDVGYAEIGAEDERSFVRFNGRPAVGLGVVKLATANTLEVAAD
ARAEMERLRADFPPGMDYEVAVDNSEFVQLAIDEVWSALYLASFLVVLVIFFFLRDWRAT
IIPAVTIPVSLISAFGVMFILDFSINTLTLFALTLATGLVVDDTIVVLENIVRYIEQEEM
KPYHAAIKGLEEVVFAVIATTVVLVAVFLPVGFATGVTGQLFAEFALTLAGSVIVSSFVA
LTLAPTLAARVLKSHSMLHGWIFDKVEDLLNATANFYASSLRLALSFKTVVVVAFVFSLG
LLWILFTQIPQGFLPAEDRGQVLTIVNAPQGVTINYTDDVMQQVEAIYEEIPEVRYYFTI
GAFGGGGPGQVNQGIAFVRLQPWEERTQPQQSQQAIVGQLFGRFSQISDALIFPVNPPAL
PGAGFGQPVQLVLQGASLEQLAEISGDLAQRANALPELMNVDTTLKITQPEVTVAIDRQK
AAALGINARDIANTLQILLGGQQITSFNRENRRYEVVVQAEERFRLSPQRLQELSLRTSE
GELVPLGNLVRLETSTTPPQIEHYQRFRSATIEGSPAAGYSLGEAIAALQTLADEMVPAD
INTELAGESLEFQEAGDATAFIFGLAMAFIFLVLSAQFESYLDPIVVLLAVPLSLIGALG
ALLLAGLELNVYSQIGLIMLIGLATKNSILIVEFANQKRDEGLSIYRAVVEAGRIRFRPI
LMTAFSTIFGLMPLAFASGAGAASRVSIGMSVVGGMFVATILSLYVVPVFYLIINGVQTR
LVRTLHLEPEH
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcagtttttcattaagcgccccgtcttcgcctccgtctgttccctcctcctg
atgctagtgggactggtgggatacggtagcttacccgtccaggaactgcccagtattgac
cctcccgtcgttagcgtcaccaccacctatccaggggccaaccccagcgtggttgaaacg
gaagtcaccgaaatcctcgaagcggaactcaacggcgttgaaggggtgcgtaccctcacc
tccgaaagtcgcgaaggcgtcagttccatcaccgttcagtttcaacttgaccaagatatc
gatattggcgctcaagaagtgcagcgcagtatctctcaggtcttaggacaactccccgat
gacgtcgactctcccgtcattcgtcgggaatccggagatgccgccccaattatttggttt
agcatttacggcgacaataacagcgtcagcaccctagaactgagtgactacgccgatcgc
gtcctcgtggatgccctagaaagcgtcaatggcgtcagtagcatcttcgtcggcggggaa
cggcgctacgccatgcgactctggatcgacccccaacgacttagcgcccgcaacctcacc
atcctagacgtcgaaaatgtgctacgtcaggaaaacatcgaacttcctagcggtcgcctt
gaaggggaacgcagcgaattttccgtgcgtaccctcgggcgactccaggaacccgaagag
tacgaagccctcgtcctccgcaccaccagcgatggaacccaaattcgcttctctgatgta
ggctatgccgaaatcggggccgaagacgaacgctccttcgtacgctttaacggccgtccc
gctgtcggcttaggggtggtgaaactggccaccgccaacaccctagaagttgccgccgat
gctcgcgccgaaatggaacgactgcgggcggacttcccaccggggatggactatgaggtg
gccgtcgataactcggaatttgtgcaactggcgatcgatgaagtctggagcgccctgtat
ctcgccagtttcttggtggtgttagtcatcttcttcttcctgcgggactggcgggccacc
atcatccccgccgtgaccattcccgtgtccctgatttccgccttcggggtcatgtttatt
ttggacttctccatcaataccctgaccctgtttgccctgactctcgccacggggctggtg
gtggacgataccatcgtggtcttagaaaacatcgtccgctacatcgaacaggaggagatg
aaaccctatcatgctgctattaagggattggaagaggtggtgtttgccgtcatcgccacc
accgtagttcttgtggcggtgttccttcccgtgggttttgccactggggtgaccggacaa
ctctttgctgaattcgctctcaccctagcagggtcagtgattgtctcctctttcgtcgcc
ctcaccctggccccaaccctcgccgcccgagtcttaaaatctcactcgatgctgcatggt
tggattttcgacaaagttgaagacctactcaatgccactgccaatttttacgcctccagt
ttacgcctggctctatcctttaaaaccgtggttgtcgtcgcctttgtcttttccctgggg
ttactgtggattttattcacacaaattccccaaggctttctccccgccgaagatcgtggc
caggttctgaccattgtcaatgcgcctcagggggtcaccattaactacaccgacgacgtg
atgcagcaagtggaagccatttatgaggagattcccgaagttcgctattacttcaccatc
ggcgcctttggaggcggtggcccaggacaggtcaatcaggggattgcctttgtgcggctg
caaccctgggaggaacggacgcaaccgcagcagtctcaacaggcgattgtgggtcagttg
tttggacgcttctcccagatttctgacgctttaatctttccggtgaatccccccgcttta
ccgggagccggtttcggacaaccggtgcagttggtgttacagggagcgagtttagagcaa
ttagcagaaatttctggagatttagcacaacgggctaatgcactcccggaattgatgaat
gtggacaccaccctgaaaatcacccagcccgaggtgacggtggccattgaccgtcaaaaa
gcggcagccttgggaattaatgcccgcgatattgccaacaccctacaaatcctcttagga
ggacaacagattaccagtttcaaccgggaaaatcgtcgctatgaagtagtggtgcaggcg
gaggaacgttttcgtttgagtccgcagcggcttcaggaactctccctacgcaccagtgaa
ggggagttagtgcctctgggtaacttagtccgcttagagacgagtactaccccgccccaa
atcgaacattatcagcgtttccgctccgccaccattgagggatctccagcggcgggttat
agtctcggggaggcgatcgcagccctacagactctggccgatgagatggttcctgcggac
atcaacaccgagttagcgggggagtcgttggagtttcaggaagccggagacgccacggcg
tttatctttggcttagcgatggcgtttatctttctggtgctatcagctcagttcgagagt
tatttagacccaattgtggtcttgttagcggttccactgtcgctcattggggcattgggt
gctttattgttggcagggttagagttgaatgtgtacagtcaaattggcttaattatgctg
attggcttagccaccaaaaactcaattttgattgtagaatttgctaatcaaaaacgagat
gaaggactgtcaatttatcgagcagttgttgaagctggtcgcattcgttttcgaccgatt
ttaatgacggctttctccaccattttcggcttaatgcccctagcctttgccagtggtgct
ggggctgccagtcgagtctccatcgggatgtcggtggtgggtgggatgtttgtggccacg
attttaagtctttacgtggttcccgtgttttatctgattatcaacggcgtacaaacccgc
ttagtccgcaccctacacctagaaccagaacattga
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