Phormidium sp. PBR-2020: JWS08_19780
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Entry
JWS08_19780 CDS
T07578
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00270
Cysteine and methionine metabolism
phor00450
Selenocompound metabolism
phor00670
One carbon pool by folate
phor01100
Metabolic pathways
phor01110
Biosynthesis of secondary metabolites
phor01230
Biosynthesis of amino acids
phor04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JWS08_19780 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JWS08_19780 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JWS08_19780 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JWS08_19780 (metH)
04980 Cobalamin transport and metabolism
JWS08_19780 (metH)
Enzymes [BR:
phor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
JWS08_19780 (metH)
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GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
Met_synt_B12
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-ProteinID:
UCJ11926
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Position
4540779..4544333
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AA seq
1184 aa
AA seq
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MTSAFLERLHSPNRPVLVFDGAMGTNLQVQNLTAEDFGGPEYEGCNEYLVKTKPDAVATV
HRGFLDAGADVIETDTFGGTPLVLAEYDLADQAYDLNKTAAELAKRITADYSTPEKPRFV
AGSMGPGTKLPTLGHIDFDSLHQAYITQVQGLYDGGVDLFLIETCQDVLQIKAALNAVET
VFEQRGQRRPIMVSVTMEQFGTMLVGSEIGAALAILEPYNIDILGLNCATGPDLMKDHIR
YLSDHSPFIVSCIPNAGLPENVGGQAHYKLTPLELRMALMHFIEDLGVQVIGGCCGTRPE
HIAALAEISRDLTPKVRHPHYEAAAASIYSTQTYEQDNSFLIIGERLNASGSKKMRTLLN
HEDWDGLVALARSQEREGAQILDVNVDYVGRDGVRDMHELVSRLVNNVKLPLMLDSTEWQ
KMEAGLKVAGGKCLLNSTNYEDGEERFYKVLEIAKQYGAGVVIGTIDEEGMARTADKKFE
IAKRAYYAAIEFGIPARELFFDPLALPVSTGIEEDRENGKATIESIRRIRQELPECHITL
GVSNISFGLNAAARQVLNSVFLHDAMEAGLDSAIVSASKILPLAKIDPDHQEVCRKLIYD
QREFDGDVCTYDPLGVLTTLFQGKSAKKTEAIDKNLPIEEQLKQHIIDGERIGLEESLEK
ARQDHEPLDIINVFLLDGMKVVGELFGSGQMQLPFVLQSAQTMKAAVAYLEPYMDKEDSD
GRGKGTFLIATVKGDVHDIGKNLVDIILSNNGYKVVNLGIKQPVENIINAYREHGADCIA
MSGLLVKSTAFMKDNLERFNEEGITVPVILGGAALTPKFVYKDCQNTYKGKVVYGKDAFA
DLHFMDKLMPAKAEGNWDDLQGFLNEVELEEEAIATESQPAADTSDTTQESETPQVVEID
TRRSEAVDVDIDRPQPPFWGTKILTPEDIPLEELFWYLDLQALIAGQWQFRKPREQSREE
YDAFLEKEVYPILDHWKRRIVEENLLHPTIIYGYFPCQSEGNSLHVYYPEEAEAGQLGEP
AATFSFPRQRSLRRLCLSDFFAPKESGVIDVFPMQAVTVGEIATKFAHELFAANEYTDYL
YYHGMAVQVAEAMAEWIHARIRRELGYGHLEPDNVRDVLAQRHQGSRYSFGYPACPKVSD
QYRQLELMGTDRIGMFMDESEQLYPEQSTTAFVVYHPVAKYFSA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgccttcctcgaacgcctccatagtcctaaccgtcccgtcctcgtcttcgac
ggtgctatgggaaccaacctacaagtgcaaaacctgaccgccgaggacttcggtggccca
gaatacgaaggctgcaacgaatacctcgtcaaaaccaaacctgacgccgtcgccacagtg
catcgcgggttcctcgacgcgggggccgatgtcatcgaaaccgataccttcggcggaact
cccctcgtcctcgccgaatatgacctcgcggaccaagcctacgacctcaacaaaaccgcc
gccgaactcgccaaacgcatcaccgccgactactcaacccccgagaaaccccgcttcgtc
gccggttccatgggacccgggaccaaactccccaccctgggccatatcgacttcgacagt
ctccatcaggcctatatcacccaagttcagggcctctacgatggcggggttgacctattc
ctgattgaaacctgtcaggatgtgctgcaaatcaaagccgcgctcaacgccgtggaaacc
gtctttgaacaacggggccaacgtcgtccgattatggtgtccgtcaccatggaacagttc
ggaaccatgctggtggggtcagagattggcgcggctttggcgattctggaaccctacaac
atcgatattctgggtctcaactgcgccacgggtcccgacttgatgaaagaccatatccgc
tatctttcagaccattcccccttcatcgtctcctgcatccccaacgccggactcccggaa
aacgtcggcggtcaagctcactataaactgactcccctggaactgcggatggccttgatg
cacttcatcgaggatttgggggtgcaggtgattggcggctgctgtggaacccgtcctgaa
catatcgcggccctggccgagattagccgcgatctgaccccgaaagttcgtcacccccat
tatgaagccgccgccgcttcgatttatagtacccaaacctatgaacaggataattccttc
ttgattattggcgaacgcctcaacgccagtgggtctaagaaaatgcggacgcttctcaat
catgaggattgggatggtttggtggccctggcgcgatcgcaggaacgcgaaggcgcacaa
atcctcgatgttaacgtcgattacgtgggccgagatggggtgcgagatatgcacgaactc
gtatcacgtttggtcaataatgtcaagctaccgttgatgttggattccaccgaatggcag
aaaatggaagcggggttaaaggtggccggtggaaaatgtctgctgaactccaccaactac
gaagatggtgaagaacgcttctataaagtcctggaaattgccaaacagtacggcgcgggg
gtggtgattgggaccatcgacgaggagggaatggcccgaaccgccgacaagaaatttgaa
atcgccaaacgcgcttactacgccgccattgagtttgggattccggcgcgggaactgttt
tttgaccccctggcccttcccgtctccacagggattgaggaagaccgggaaaatggtaaa
gccaccattgaatccatccgtcgcattcgtcaggaactcccggaatgtcatattactctg
ggggtttctaatatctcctttggcttgaatgcagcggcgcgacaggttctcaattccgtg
tttctccatgatgccatggaagcgggattagattcagccattgtcagcgccagtaagatt
ttacccctggctaagattgaccccgaccatcaggaagtctgccgcaaactgatttatgat
caacgggagtttgatggggacgtttgtacctatgaccccctgggggtgttaacaaccctg
tttcaagggaaatctgctaagaaaaccgaagccattgataagaatcttcccattgaggaa
caacttaaacagcatattattgatggggagcggattggcttagaggagtccttggaaaaa
gcgcgtcaagaccatgaacccttggatattattaatgtcttcctcctagatgggatgaag
gtggttggggagttatttgggtcgggacaaatgcagcttccttttgtcttgcagtcggcg
caaaccatgaaggcggcggtggcttatctggaaccttatatggataaggaggactccgat
ggtcgcggtaagggaacctttttgattgcaaccgtcaagggagatgttcatgatattggc
aagaatttagtcgatattattctttccaataatggctacaaggttgttaatttggggatt
aaacaaccggtggaaaacatcatcaatgcctatcgagaacatggggcggattgtattgcc
atgagtggcttgttggtgaaatcgacggcatttatgaaggataatttggagcggtttaat
gaggagggaattaccgttccggtgattttagggggggcagcgcttacgcctaagtttgtt
tataaggactgtcaaaacacctataaaggcaaggttgtttatggcaaagatgcctttgct
gacttgcattttatggacaagttaatgccagccaaagctgagggcaattgggatgatttg
cagggctttttgaatgaagtggaattagaggaggaggcgatcgccaccgagtcacagcca
gccgctgacacatcagacaccactcaggagtcggaaacgcctcaagtggtggaaatcgat
acccgccgttctgaggcggtagatgtagatatcgatcgcccccaaccgccgttctgggga
accaagattctcaccccggaggatatccccctagaggagttattctggtatttggattta
caggctttgattgcgggacaatggcaattccgcaaacctcgggaacagtctcgggaggag
tatgacgctttcttagagaaagaggtctatcccattctggaccattggaagcggcggatt
gtcgaggagaatctcctacatccgacgattatttacggctatttcccctgtcagtcggag
gggaattcccttcatgtgtattacccggaagaggcggaagcgggccagttaggggaaccg
gcggcgacgtttagttttccccgtcagcgatcgctacggcggttgtgtttgtcggacttc
tttgcacctaaggagagtggggtgattgatgtcttccccatgcaggcggtgacggtggga
gaaatcgccacgaagttcgcccatgaactgtttgcggccaatgagtacacggattatctc
tattatcacggcatggcggtacaggtcgccgaggccatggcggagtggattcacgctcgc
attcgccgagagttggggtatggccatctcgaaccggataatgtgcgggatgtgttggcg
caacgccatcaggggtcacgctatagttttggctatccggcttgtccgaaggtgtcggat
caatatcgccagttggagttgatgggaactgatcgcattgggatgtttatggatgagagt
gaacaactctatcctgaacagtctacgacggcgtttgtggtgtatcacccggtggcgaag
tattttagtgcttga
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