Phaeobacter sp. LSS9: D1820_09220
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Entry
D1820_09220 CDS
T05617
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1820_09220 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phq03400
]
D1820_09220 (nth)
Enzymes [BR:
phq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D1820_09220 (nth)
DNA repair and recombination proteins [BR:
phq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D1820_09220 (nth)
Prokaryotic type
D1820_09220 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AXT35141
LinkDB
All DBs
Position
1945165..1945809
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AA seq
214 aa
AA seq
DB search
MAKQLDYHTLREIFTRFQAADPEPKGELEHVNVYTLVVAVALSAQATDAGVNKATRALFQ
IADTPQKMLDLGEEGLTEHIKTIGLYRQKAKNVIKMSRILVEDYGGVVPNSRAALQSLPG
VGRKTANVVLNMWWRQPAQAVDTHIFRVGNRAGIAPGKDVDAVERAIEDNIPADFQLHAH
HWLILHGRYHCKARKPMCPTCIIRDLCQFEDKTL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaactcgattatcacaccctgcgtgagatcttcacgcggtttcaggcagcg
gatccagaacccaaaggggagctggagcatgtcaacgtctacacattggtggtggcggtg
gcgctgtcggcacaggctacggatgccggcgtcaacaaggcaacccgcgcgctgtttcag
atcgcagataccccgcagaagatgctggatctgggcgaagagggtctgaccgaacatatc
aagaccattggcctataccgtcagaaggccaagaacgtgatcaagatgtcacgcattctg
gtcgaggattacggcggtgtggtgcccaattcccgcgctgccttgcaatcgctgcccggc
gtcgggcgcaagacggcaaatgtggttctgaacatgtggtggcgccagcccgcacaggcg
gtggacacccatatctttcgcgttggcaaccgggcgggcattgcgccgggcaaggatgtc
gatgcagtcgaacgcgccatcgaagacaatattccggcagattttcagctccatgcccat
cattggctgatcctgcacggacgctaccattgcaaagctcgcaaaccgatgtgccccacc
tgcatcatacgcgatctctgccagtttgaggataaaactctatga
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