Phreatobacter cathodiphilus: C6569_00605 Help Entry C6569_00605       CDS       T05356                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism phr  Phreatobacter cathodiphilus Pathway phr03030   DNA replication phr03410   Base excision repair phr03420   Nucleotide excision repair phr03430   Mismatch repair Brite KEGG Orthology (KO) [BR:phr00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     C6569_00605    03410 Base excision repair     C6569_00605    03420 Nucleotide excision repair     C6569_00605    03430 Mismatch repair     C6569_00605  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:phr03032]     C6569_00605    03400 DNA repair and recombination proteins [BR:phr03400]     C6569_00605 Enzymes [BR:phr01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      C6569_00605 DNA replication proteins [BR:phr03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      C6569_00605 DNA repair and recombination proteins [BR:phr03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      C6569_00605    NER (nucleotide excision repair)     GGR (global genome repair) factors      C6569_00605    MMR (mismatch excision repair)     DNA ligase      C6569_00605   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       C6569_00605 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 DNA_ligase_ZBD PTCB-BRCT Nlig-Ia Zn_ribbon_NUD HALZ Motif Other DBs NCBI-ProteinID:  AVO43697 UniProt:  A0A2S0N6R1 LinkDB All DBs Position 122592..124721 Genome browser AA seq 709 aa AA seqDB search MSKRPAPNAPLDSLTADEARLEHERLAEAIAEADRQYYQDDAPTLTDADYDALRRRYEEL EVAFPALKTADSLSRKVGAAPAGKFGKVTHAVPMLSLSNAFADEEVVDFVGRVRRFLGLG ADEPVAMTAEPKIDGLSCSLRYERGELTVAATRGDGAVGEDVTANIRTIDEIPKTLKGAP DVLEVRGEVYLSHADFRRINARQEERGLPPFANPRNAAAGSLRQLDPRITAERPLHFFAY AWGEISPERPRDTQSGMVGWFRELGFPTNPLTVVRDSAEGLLGHYREIEAKRATLGYDID GVVYKVDSLALQARLGFVSRSPRWAIAHKFAAEKATTILDAIDIQVGRTGALTPVAKLRP VTVGGVVVSNATLHNEDYIRGVGTDGERFREHDIRVGDTVIVQRAGDVIPQVLDIVAEKR PADAKPYAFPTTCPACGSPAIREEGEAVRRCTGGFACPAQAVERLRHVVSRRVLDIEGLG AERLPFFFSDPDLPIREPADIFTLARRDAQNLKKLRDKEGFGALSVKNLFEAIEQSRTVP LDRLIAALGIRHIGETTARVLARAYGTWQAFHDAAVRLAEGDAETRHELDSLDQIGDAVI DAVAAYFAEPRNRAMVERLVAELVVQEAEKPKSDTPVAGKTVVFTGSLEKMTRDEAKAMA ERLGAKVAGSVSKKTDYVVAGPGAGSKLDKARDLGVAVMTEDEWFEFVK NT seq 2130 nt NT seq  +upstreamnt  +downstreamnt atgtcgaaacgtcccgcccccaacgcccccctcgacagtctgaccgccgacgaggcccgc ctcgagcatgagcgcctcgccgaggccatcgccgaggccgaccggcaatattaccaggac gacgcccccaccctcaccgacgccgattacgacgcgctgcgccgccgctacgaggagctg gaggtcgcctttcccgccctgaagaccgccgacagcctgagccggaaggtcggcgcggcg ccggccggcaaattcggcaaggtcacccacgccgttcccatgctctccctctccaacgcc ttcgccgacgaggaggtggtggacttcgtcggccgcgtgcgccgcttcctcggcctcggc gccgacgagcccgtggccatgaccgccgagccgaagatcgacggcctgtcctgctcgctg cgctacgagcgcggcgaactcaccgtggccgccacccgcggcgacggcgccgtcggcgag gacgtcaccgcaaacatccgcaccatcgacgagatcccgaagacgctgaagggcgccccg gacgtgctggaggtgcgcggcgaggtctatctctcccacgcggatttccgccgcatcaac gcccggcaggaggagaggggcctgccgcccttcgccaatccgcgcaatgccgccgccggc tcgctgcgccagctcgacccgcgcatcaccgccgagcggccgctgcacttcttcgcctat gcgtggggcgagatcagcccggaacggccgcgcgacacccagtccggcatggtcggctgg ttccgcgaactcggcttccccaccaatccgctgaccgtcgtgcgcgacagcgccgagggc ctcctcggccattaccgcgagatcgaggcgaagcgcgccaccctcggctacgacatcgac ggcgtcgtctacaaggtggacagcctcgccttgcaggcccgcctcggcttcgtctcgcgc tcgccgcgctgggccatcgcccacaagttcgccgccgagaaggcgacgaccatcctcgat gccatcgacatccaggtcggccgcaccggcgcgctcacccccgtcgccaagctgcgcccg gtcaccgtgggcggcgtcgtcgtctccaacgccacgctgcacaacgaggactacatcagg ggcgtcggcaccgacggcgagcgcttccgcgagcacgatatccgcgtcggcgacaccgtg atcgtccagcgcgccggcgacgtcatcccgcaggtgctcgacatcgtggccgagaagcgc ccggccgatgcaaagccctacgccttcccaaccacctgcccggcctgcggcagccccgcc atccgcgaggagggcgaggcggtgaggcgctgcaccggcggcttcgcctgtccggcccag gccgtggagcggctgcgccacgtcgtctcgcgccgcgtgctcgacatcgagggcctgggg gccgaacgcctgcccttcttcttctcagatcccgacctgccgatccgcgagccggccgac atcttcaccctcgcccgccgcgacgcgcagaacctgaagaagctgcgcgacaaggagggc ttcggcgcgctctcggtgaagaacctcttcgaagccatcgagcagagccgcaccgtgccg ctcgaccggctgatcgccgcgctcggcatccgccacatcggcgagacgacggcgcgcgtc ctcgcccgcgcctacggcacctggcaggccttccacgacgcggcggtgcgccttgccgag ggcgatgccgaaacccgccatgaactcgattcgctcgaccagatcggcgatgccgtcatc gacgccgtcgccgcctatttcgccgagccgcgcaaccgcgccatggtcgagcgcctcgtc gccgaactcgtggtgcaggaggccgaaaagccgaaatccgacacccccgtcgccggcaag accgtggtcttcactggctcactcgagaagatgacgcgtgacgaggccaaggccatggcc gagcggctcggcgccaaggtcgcgggatcggtgtcgaagaagacggattacgtggtcgcc ggccccggtgcggggtcgaagctcgacaaggcgcgcgacctcggggtcgccgtcatgacc gaggacgaatggttcgagttcgtgaaataa

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