Pediculus humanus corporis (human body louse): Phum_PHUM528630
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Entry
Phum_PHUM528630 CDS
T01223
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component, putative
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM528630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM528630
Spliceosome [BR:
phu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
Phum_PHUM528630
Complex C
U5 SnRNP specific factors
Phum_PHUM528630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
8235016
NCBI-ProteinID:
XP_002431425
UniProt:
E0VZ81
LinkDB
All DBs
AA seq
974 aa
AA seq
DB search
MDADLYDEFGNYIGPDLESDDEEDEDVTSREQEAQDYDDDGDDDREMEDADIAPMSVVLH
EDKRYYPNALEVYGPEVETIVQEEDNQPLTTPLVAPVKRKKFQVKQQQQLPKTTYDMEFL
ADMMDNAALIRNVALVGHLHHGKTTFVDCLIRQTHPDFQSTEEKNLRYTDTLFIEQARGV
STKAMPVTLVLPDVKSKSYLMNIFDTPGHVNFCDEATAAMRICDGVVIFVDAAEGVVLNT
ERLLKHAVQEKVAITVCINKIDRLILELKLPPNDAYYKLRHIVEEVNGLLSLYSDNENPH
VVSPLLGNVCFSSSQYAVCFTLKSFANIYNQTYGGININEFAKRLWGDIYFNSKTRKFSK
KPPHNSAQRSFVEFILEPLYKIFTQVVGDVDTTLPQVLDELGIRLTKEEMKINIRPLLRL
VCSRFLGDFNGFVDMCVNHIPSPQSNAKNKVQHVYTGPIDSDLAQDMINCSAEGHLMVHS
TKMYPTDDCTFFLVLGRVMSGTLHANQEVRVLGENYTLQDEEDSRILTVGRLWVYEARYK
IEVNRVPAGNWVLIEGIDQPIVKTATITDINTDDDLYIFRPLKFNTQSVIKIAVEPVNPS
ELPKMLDGLRKVNKSYPLLSTRVEESGEHVVLGTGELYLDCVMHDLRNMYSEIDIKVADP
VVTFCETVVETSSLKCFAETPNRKNKITMIAEPLEKGLAEDIENEIVHISWNKKRLGEFF
QTKYDWDLLAARSIWAFGPDITGPNILVDDTLPSEVDKGLLNSVKDSIVQGFQWGTREGP
LCEEPIRNVKFKILDAVIASEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVQVQA
PADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSLGFETDLRTHTQGQAFCL
SVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMVKTRRRKGLSEDVSINKFFDDPML
LELARQDVMLNYPL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatttgtatgatgagtttggaaattatatagggccagatttagaatctgac
gatgaagaagatgaagatgtcacttccagagagcaagaggcacaggattatgatgatgat
ggggatgatgatagagaaatggaggatgctgatatagctcccatgtcagttgtattgcat
gaagataaacgatattatcctaatgccttggaagtgtatggtccagaggttgaaacaatt
gttcaagaagaagataatcaacctttgacaactccattagtggctcctgttaaaagaaaa
aaatttcaagttaaacaacaacaacaacttcctaaaacaacttatgatatggaattttta
gctgacatgatggataatgcagctttaataagaaatgtagcattagttggtcatcttcat
catggtaaaacaacatttgtagattgtttaattcgtcaaacacatcctgactttcaatcg
acagaagaaaaaaatttaagatacacagatacacttttcattgagcaagctagaggagtt
tcaacaaaagccatgcctgtaacattggttttacctgatgtaaaaagtaaaagttattta
atgaatatatttgacacacctggacatgtcaatttttgtgatgaagctactgctgccatg
agaatttgtgatggagttgtaatctttgttgatgctgctgaaggtgttgttttaaataca
gaaagactgttaaagcatgctgttcaagaaaaagttgccataacagtttgtatcaataaa
attgatcgtcttattctggaacttaaacttcctcccaatgatgcttattataaattaaga
cacattgtagaagaagtaaatggtcttttaagcttatactctgataatgaaaatccacat
gtggtttcaccacttttaggaaacgtttgtttttcaagttctcaatacgcggtttgtttc
actctaaaaagttttgcaaatatatacaatcaaacttatggtggaataaatataaatgaa
tttgctaaaagactttggggcgacatttattttaattctaaaacgagaaagttttcaaaa
aagccaccacacaatagcgctcaaaggagttttgtcgaattcatacttgagcccctatat
aaaatttttactcaggtggtcggagatgtggatacaactcttcctcaagtattagacgaa
ttaggtataagattaacaaaagaagaaatgaaaataaatataaggcccttgcttagattg
gtgtgcagtcgatttttaggagatttcaatggtttcgtagacatgtgcgtgaatcacatt
ccaagtcctcaatcgaatgccaaaaataaagttcaacacgtttatacaggcccgatagat
tctgatttagcacaagacatgataaattgttcagccgagggtcacttaatggttcacagt
acaaaaatgtatcctacggacgactgtacattttttttggttttgggaagagtcatgtcg
ggaactcttcacgctaatcaagaagttcgcgttctgggtgaaaattatacgttacaagat
gaggaagatagtcggattttaaccgttggaagactttgggtttacgaagcgaggtataaa
atagaagtcaaccgagtacccgctggtaattgggttcttattgaaggaatcgatcagccc
attgttaaaactgcaaccataactgacataaatacggatgacgatctttacatatttaga
ccgttaaaatttaacactcaatccgttattaaaatagccgttgaaccggttaatccttct
gaacttccgaaaatgttggacggtttgagaaaagttaacaaatcttatcctttactttcg
actagagtcgaagaatctggagaacacgtagttttaggtaccggagaattatatttggat
tgtgttatgcacgatctcaggaacatgtattcagaaatagatataaaagtagccgatcct
gtcgttacattttgcgaaaccgtcgttgaaacttcatctcttaaatgcttcgccgaaact
ccaaacaggaaaaataaaataaccatgattgccgagcctttggaaaaaggtttagcagaa
gatattgaaaatgaaatagttcacatatcgtggaataaaaagcgactcggagagtttttc
cagacaaaatacgattgggatttattagccgctcgatccatttgggcgttcggtcctgat
ataacaggtccaaatattttggttgacgacacgctaccttcagaggtcgataaaggattg
ttgaattcggttaaagattcaattgttcaaggttttcaatggggaacaagggagggacca
ctttgtgaagaacccatacgtaacgtgaaatttaaaattctcgatgccgttatcgcttca
gagccattgcacagaggaggaggtcaaataattccaacggctcgtagagttgcttattcc
gcttttctaatggccacgccgagattgatggaaccttatttgttcgttcaggttcaagca
ccggcggattgcgtatctgccgtttacacggtattagcaaaaagaagaggtcacgtcact
caagatgctccggtaccgggttcaccgctttacacaatcaaagctttcatacctgcgata
gattctctaggattcgaaacggatttaagaacgcacacgcagggtcaagcattttgcctt
tcggttttccaccattggcagatcgttccgggtgatccccttgataaaagcatcgttatt
cgacctttagaacctcaacctgcgactcatctggcaagagaattcatggttaaaacaaga
agaagaaaaggattgtccgaagatgtatcaatcaataaatttttcgacgatcccatgttg
ctggaacttgctagacaggacgttatgcttaattatcctctgtaa
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