Primulina huaijiensis: 140962765
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Entry
140962765 CDS
T11038
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
phua Primulina huaijiensis
Pathway
phua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140962765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140962765
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140962765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SMC_N
AAA
DUF3584
AAA_30
AAA_15
ATP-synt_ab
TsaE
ORC-CDC6-like
AAA_23
Zeta_toxin
nSTAND3
RsgA_GTPase
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
140962765
NCBI-ProteinID:
XP_073277846
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All DBs
Position
17:2622696..2627594
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AA seq
329 aa
AA seq
DB search
MAVREENSRPAVVINSLSFTYPGIDGHPPPGSTPLIDEFSLTLHSGDRCLLVGSNGAGKT
TLLKIIGGKHMVEQDMVKVFGRSAFHDTALTASGDLSYLGGEWRREVAFAGFEVPIRMEI
SAEKMIFGVAGIHPQRREELIKVLGIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDE
ITVDLDVLARSDLLRFLKKECEERGATIIYATHIFDGLEDWPSHIAYVARGKLQLVMPMN
KIKEISKLSLMRTVESWLRKERDDERERRKERKANGTPEYDKRVEGSRVAGDPARAAVRV
LNNGWAAGRLNSTVAGEESFSFSSNRVLR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacgggaggagaactcgcgacccgcggtggtgatcaacagcctcagcttcact
tacccaggaatcgacggccatcctcctccaggttccacccctttgatcgatgaattttct
ctcactctccactccggcgatcgttgtcttcttgttggctctaatggcgcggggaaaaca
actttactgaaaataattggtgggaagcacatggtagaacaagatatggtaaaggttttc
ggaagatctgcatttcatgacacagcattgacggcttcaggagacctctcttatcttggt
ggcgagtggagacgagaagttgcttttgctggttttgaggttccaattcggatggagatt
tctgctgagaaaatgatatttggggttgcaggtatccatccccaaagacgagaagaattg
attaaggtgttgggtattgacttgtcctggagaatgcataaagtatctgatggtcaaaga
agaagagttcaaatatgtatgggccttctaaagccattcaaggtactattgctcgatgaa
ataacggttgacttagatgtgcttgcacggtctgaccttctaagatttctaaagaaagaa
tgtgaagaacggggtgccacaataatctatgcaacacatatttttgatggccttgaggac
tggccatcacatatcgcttatgtggctcgtgggaagttgcagctagtgatgccaatgaat
aaaatcaaagagattagcaagttgtcactgatgagaactgtggagagttggctgagaaaa
gagagagatgatgagcgggagcgaaggaaagagagaaaagctaatggtactccagaatat
gacaaaagagtcgaaggcagtcgtgtagctggtgatccagctcgcgctgctgtccgcgtg
ctaaataacgggtgggctgctgggaggctgaattcaactgtagctggtgaagaaagcttc
tcctttagctctaacagagtcctcagataa
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