Paraburkholderia kururiensis: U0042_16975
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Entry
U0042_16975 CDS
T10320
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
phun Paraburkholderia kururiensis
Pathway
phun00300
Lysine biosynthesis
phun00550
Peptidoglycan biosynthesis
phun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phun00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U0042_16975
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U0042_16975
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phun01011
]
U0042_16975
Enzymes [BR:
phun01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
U0042_16975
Peptidoglycan biosynthesis and degradation proteins [BR:
phun01011
]
Precursor biosynthesis
Amino acid ligase
U0042_16975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WQD75828
LinkDB
All DBs
Position
complement(3803240..3804811)
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AA seq
523 aa
AA seq
DB search
MIALHKRARAQHPAHARIAEALAWLGAHVQRGADLHADTRALKPGDVFVAYAVDGADNRP
FIDNAIERGASAVLYQPEGFGDAVSAVASLAVPALDALAGDIASGWYGDPSDAMLVIGVT
GTNGKTSCSQWVASALTALGKPCAIVGTLGSGMPGQLVHTGFTTPDAPQLQRSLARLRTG
GAQAVGMEVSSHALHQGRVNGTAFDIAIFTNLTQDHLDYHGTFEAYEAAKAKLFAWPGLH
CAVINRDDEAGRRFIAATQGRVRTIAYGIAADGEASGMAAPTADAFLTASNVRATATGTA
FHLSTSDWGAADVEVMTLGAFNVSNLLGVLGALLAADVPFAAALAEIAKLEPVNGRMQRL
GGRLDHDEPLVVIDYAHTPDALEKTLEALRPMAAARGGQLVCMFGCGGDRDATKRPLMGG
IAERLADTVVVTSDNPRSEDPAKIIDQIVAGMTKPDAARRVEDRASAILQAVRGAAREDV
IVLAGKGHEATQEIMGKKRAFSDQDHARLALAARATHVRGGGE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgctgcacaaacgggcccgcgcccagcatcccgcacatgcccgaatcgcggag
gcgcttgcatggctcggcgcgcacgtgcaacgcggcgccgacctgcatgccgacacgcgc
gcgctcaagcccggcgacgtgttcgtcgcctacgccgtggacggcgccgacaatcgcccg
ttcatcgacaacgccatcgagcggggcgcgtccgccgtgctgtaccagccggaaggtttc
ggcgatgccgtcagcgccgttgcctcgctcgcggtgcctgcactcgacgcgctggccggc
gacattgcgagcggctggtacggcgacccgagcgacgcaatgttggtgatcggcgtgacc
ggcaccaacggcaaaacttcgtgcagccagtgggtggcgagcgcgctcacggcgctcggc
aagccctgcgccattgtcggcacgctcggcagcggcatgccggggcaactcgtccacacc
ggtttcacgacgccggatgcgccccaactccagcgcagccttgcacgactacgcaccggc
ggtgcgcaggcggtgggcatggaggtgtcgtcgcacgcgcttcatcaagggcgcgtgaac
ggcacggcgttcgacatcgcgatcttcacgaacctcacgcaagaccatcttgactatcac
ggcacgttcgaagcctacgaagccgccaaggcgaagctcttcgcgtggcccggactgcac
tgcgcagtgatcaatcgcgacgacgaagccggccgccgcttcatcgccgctacgcaaggc
cgcgtgcgcacgatcgcctacggcatcgccgcggacggtgaggcttcgggcatggctgcg
ccgaccgccgacgcgttcctcaccgcgagcaacgtgcgcgccaccgcaaccggcaccgcg
ttccatctgtcgacgtccgattggggcgcagccgatgtcgaagtgatgaccctcggcgcc
ttcaacgtcagtaatctgctcggcgtgctgggcgcgctgctcgcggccgacgtgccgttc
gcggctgcgctggccgaaatcgcgaagctcgaaccggtgaacggccggatgcaacgcctt
ggcggccgtctggatcacgacgagccgctcgtcgtgatcgactacgcgcacacgccggac
gcactcgaaaagacgctggaagcgctgcgccccatggctgccgcgcggggcggccagctc
gtctgcatgttcggctgcggcggcgaccgcgacgcgaccaagcgtccgctgatgggcggc
attgcggaacggctcgccgataccgtcgtcgtcacgagcgacaacccgcgcagcgaagac
ccggcgaagatcatcgaccagatcgtcgcgggcatgacgaaacccgatgcagcgcgccgc
gtcgaagaccgcgcgagcgcgattttgcaagccgtgcgcggcgctgcgcgcgaagacgtg
atcgtgctcgcgggcaagggacacgaagccacacaggaaatcatgggcaagaagcgcgct
ttctccgatcaggatcacgcacgcctcgcgcttgcggcgcgtgccacgcacgtccgtgga
ggtggcgaatga
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