Pseudomonas hygromyciniae: JTY93_12335
Help
Entry
JTY93_12335 CDS
T09404
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
phyg
Pseudomonas hygromyciniae
Module
phyg_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyg02000
]
JTY93_12335
01504 Antimicrobial resistance genes [BR:
phyg01504
]
JTY93_12335
Transporters [BR:
phyg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JTY93_12335
Antimicrobial resistance genes [BR:
phyg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
JTY93_12335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QSB42053
LinkDB
All DBs
Position
complement(2791929..2795108)
Genome browser
AA seq
1059 aa
AA seq
DB search
MNFSKFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG
ETVASPLEQAITGVENMLYMSSQSTADGKLTLTITFALGTDLDNAQVQVQNRVTRTQPKL
PEEVTRIGITVDKASPDLTMVVHLTSPDQRYDMLYLSNYAILNIKDELARLGGVGDVQLF
GMGDYSLRVWLDPNKTASRNLTATDVVTAIREQNRQVAAGALGAQPAPSDTSFQLSVNTQ
GRLVTEEEFENIVIRAGDNGEITRLKDIARVELGSSQYALRSLIDNQPAVAIPIFQRPGS
NAIDISNDVRSKMAELKKSFPEGMDYRIAYDPTVFVRGSIEAVVHTLFEALILVVLVVIL
FLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
RNIELGLEPFPATEKAMSEVTGPIIATALVLCAVFIPAAFISGLTGQFYKQFALTIAIST
VISAFNSLTLSPALAAVLLRSHDAPKDRFSRFLDKLFGGWLFRPFNRFFEKASHGYVGTV
RRVIRGTGIALFVYGGLMVLTFFGFAHTPTGFVPAQDKQYLVAFAQLPDAASLDRTENVI
KRMSDIALKQPGVESAIAFPGLSINGFTNSPNSGIVFVTLKPFGERKDPSMSAGAIAGAL
NGKYADIQEAYMAIFPPPPVQGLGTIGGFRLQVEDRGNLGYEELYKEVQNVIAKSHNVPE
LFGLFTSYTVNVPQVDAAIDREKAKTHGVAISDIFDTLQIYLGSLYANDFNRFGRTYQVN
VQAEQQFRLDQDQIGQLKVRNNKGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGNAA
PGYSSGQAEAAIEKLLKEELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ
YESWSLPLAVILIVPMTLLSAITGVILSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD
KQEEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVFSSGAGAEMRHAMGVAVFSGMI
GVTFFGLLLTPVFYVLIRRYVERSDARKAAKALKLETQQ
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttccaagttcttcatatcgcggccgatcttcgcagcagtgttgtcgctgctg
atcctgatcgccggcgcgatctcgctgttccaattgcccatcagcgaatacccggaagtg
gtaccgccaaccgtggtggtgcgcgccaacttcccgggcgccaaccccaaagtcatcggc
gaaaccgtggcctcaccgctggagcaggcgatcaccggcgtcgagaacatgctctacatg
tcctcgcagtcgaccgccgacggcaagttgaccctgaccatcaccttcgccctgggtacc
gacctggataacgcccaggtgcaggtgcaaaaccgcgtaacgcgcactcagccaaaactg
cctgaagaagtgacgcgcatcggtatcaccgtggacaaggcctcccccgacctgaccatg
gtggtgcacctgacatccccggatcagcgctacgacatgctctacctgtccaactacgcg
atcctcaatatcaaggatgagttggcacgactgggtggcgtgggcgatgtgcagctgttc
ggcatgggcgattactccctgcgggtatggctggatccgaacaagaccgcctcgcgcaac
ctgactgccacggatgtggtgaccgcgattcgcgaacagaaccgccaggtggccgccggt
gccctgggcgcgcagcctgcgcccagcgacaccagcttccaattgtcggtcaatacccag
ggccgcctggtcactgaggaagagttcgaaaacatcgtgattcgcgccggcgacaacggc
gagatcacgcgcctgaaagacatcgcccgcgttgagctgggctccagtcaatatgccctg
cgctcgctgatcgacaatcaaccggcggtggcgattccgatcttccagcgccctggctcc
aacgccatcgatatctctaacgatgtgcgcagcaaaatggcggagctgaaaaagagcttc
cctgaaggcatggattaccgcatcgcctacgacccgaccgtgtttgtgcgtggctcgatc
gaagcggtggtccacaccttgttcgaggcgttgatcctggtagtactggtggtgatcctg
ttcctgcagacctggcgtgcgtcgatcattcccctggtcgcggtgccggtatcgttgatc
ggcacctttgcggtgatgcacctgttcggcttctccctcaatgcgctgtcgctgttcggc
ctggtgttggccatcggcatcgtggtggacgacgccattgtggtggtggagaacgtcgaa
cgtaacatcgagctgggcctggagcccttcccggccacggaaaaagccatgagcgaagtg
accgggccgatcattgccacggcgctggtgctgtgtgcggtgtttattccggccgccttt
atcagcggcttgaccgggcagttctacaaacaatttgcgttgacgattgccatctccacc
gtgatctcggcgttcaactccctgactctgtcgccggccctggcagcggtattgctgcgt
agccatgacgcgccgaaagaccggttctcccggttcctcgacaagctctttggtggctgg
ctgttccgtccattcaaccgattttttgaaaaagccagccatggctacgtaggcaccgtg
cgccgggtgattcgcggcaccggtatcgcgctgttcgtgtatggcggcctgatggtgctg
accttcttcggctttgcccatacgccgaccggtttcgtaccggcccaggacaagcagtac
ctggtggctttcgcccagttgccggacgccgccagcctggaccgcaccgaaaacgtgatc
aagcgcatgtccgacatcgccctgaaacagcccggcgtggaaagcgccatcgccttcccg
ggcctgtcgatcaacggtttcaccaacagcccgaacagcggcatcgtgttcgtgaccttg
aagcccttcggcgagcgcaaggatccgagcatgtccgccggggcgattgccggagcgttg
aacggcaagtacgccgatatccaggaagcctacatggcgatcttcccaccgccgccggta
cagggcctgggcactattggcgggttccgcctgcaagtcgaagaccgcggcaacctgggc
tacgaagaactgtacaaagaagtgcagaacgtcatcgccaagagccacaacgtgccggaa
ctgtttggcctgttcaccagctacacggtcaacgtgccccaggtcgatgcggctatcgac
cgtgaaaaggccaagacccacggcgtggcgatcagcgacatcttcgacaccctgcagatc
tacctgggctcgttgtatgccaacgacttcaaccgcttcggccgtacctatcaagtcaac
gtgcaggctgagcagcagttccgcctcgaccaagaccagatcggccagctgaaagtgcgc
aacaacaagggcgagatgatcccgctggcgacctttatcaaggtcagtgacacctcgggg
ccggatcgcgtgatgcactacaacggctttatcaccgccgagatcaacggcaacgcggcc
cctggctacagctcgggccaggctgaggcggcgatcgagaaactgctcaaggaagaactg
cccaacggcatgacctacgagtggacggacctgacctatcagcaaatcctctcgggcaat
accgcactgttcgtgttcccgctctgcgtactgctggcgttcctggtactggccgctcag
tacgaaagctggagcctgccactggcggtgatcctgatcgtcccgatgactctgttgtcg
gccattaccggggtgattctgtccggtggtgacaacaacatctttacccagatcggcttg
atcgtactggtgggcctggcctgtaagaacgcgattctgatcgtcgaattcgccaaggac
aaacaggaagaaggcctcgacccgctggctgcggtactggaagcctgccgcctgcgtctg
cggccgatcctgatgacctcgttcgccttcatcatgggcgtggtgcccttggtgttctcc
agcggcgcgggtgccgagatgcggcacgccatgggtgtggcggtgttctccgggatgatc
ggggtgaccttcttcggcctgttgctgacgccggtgttctacgtgttgatccgccgttat
gtggagcgcagcgatgcacgcaaagcggccaaggccttgaagctggagacacagcaatga
DBGET
integrated database retrieval system
