KEGG   Pangasianodon hypophthalmus (striped catfish): 113524074
Entry
113524074         CDS       T05759                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03420  Nucleotide excision repair
phyp04110  Cell cycle
phyp04114  Oocyte meiosis
phyp04120  Ubiquitin mediated proteolysis
phyp04141  Protein processing in endoplasmic reticulum
phyp04310  Wnt signaling pathway
phyp04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113524074 (rbx1)
   04120 Ubiquitin mediated proteolysis
    113524074 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113524074 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    113524074 (rbx1)
   04350 TGF-beta signaling pathway
    113524074 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    113524074 (rbx1)
   04114 Oocyte meiosis
    113524074 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phyp04121]
    113524074 (rbx1)
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113524074 (rbx1)
Enzymes [BR:phyp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     113524074 (rbx1)
Ubiquitin system [BR:phyp04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   113524074 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     113524074 (rbx1)
   Cul2 complex
     113524074 (rbx1)
   Cul3 complex
     113524074 (rbx1)
   Cul4 complex
     113524074 (rbx1)
   Cul7 complex
     113524074 (rbx1)
   Cul8 complex
     113524074 (rbx1)
   Cul9 complex
     113524074 (rbx1)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      113524074 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      113524074 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 113524074
NCBI-ProteinID: XP_026765998
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGSNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggctgcgatggatgtcgacaccccgagcgggtcaaacagcggcgcgagtaaaaag
cgttttgaagtgaaaaagtggaatgcagtggctctgtgggcgtgggacatcgtggtggat
aactgtgccatctgcagaaaccacatcatggacctgtgtatagagtgtcaggccaatcag
gcttctgccacatcagaggagtgcacagtggcctggggagtgtgtaaccatgcgtttcat
ttccactgcatctcccgctggctgaagacgaggcaggtgtgtcctctggacaacagggag
tgggagttccagaagtacggacactga

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