Pangasianodon hypophthalmus (striped catfish): 113524163
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Entry
113524163 CDS
T05759
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113524163
Cell adhesion molecules [BR:
phyp04515
]
Cadherins
Protocadherins
113524163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
AGRB_N
Motif
Other DBs
NCBI-GeneID:
113524163
NCBI-ProteinID:
XP_026766115
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MGIMSFFRRKIYCCYFILMWNTIEAHVRYVIPEELRGGSVVGNIAKDLGLDLSEVADRKL
RIASESGKQYFSVAADSGELIVNERIDRESLCGHTALCLLPLEAVVENPLQLHRVEIEIQ
DINDNTPSFNSNQRILNIPESINPGAKFLLESADDPDVGSNSLQSYTLGSNKYFVLNVKT
QDGIKIPELVLDKPLDREKQATHRLVLTAVDGGKPVRSGTCEVNVIVLDINDNAPQFEKS
FYEANVAENELIGNDIIKVSAVDVDEGANGEIEYVFADKTSDAVKAVFDINPTTGVISVK
GKLDFEQANLYKFDLMAKDKGNPQMEGHCSVKIMISDINDNAPEIVITSLSTPVPENSPN
NTVIALISTKDADSGENGKVNLTVASGSPFRLNPSLSNRYTLVTNGPLDREKYPEYEIKL
NAVDSGVPALHAEKIVKISISDVNDNPPVFSQKSYTVYTRENTAHGSILCSVSAHDPDLA
QNAKISYSILDSKVQDVSISSYIYINSDNGSIHTMHSFDYEKMKVFQLQVQAKDHGSPSL
SSNATVHVFIVDQNDNAPAVIYPSALMGSVSHQRMPRSAKAGHLVTKVTAVDADSGHNAW
ISYRLAEATDASLFTVTLHTGEVRTKRSVAEQDDSSQRLLIEIKDNGEPVQSTTVTVDIL
IEDGFHEPVSDFRHKNTEPDKKSSKITLYLIISLASVSLLCLVTFLVLLVKCARSSRGSS
SCCIRRSDCEYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSEFSDFTL
VKPSSTTDFTNTLSVLDASLPDSTWTFESQQVRIY
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgggaattatgtcgtttttcaggaggaagatatactgctgttatttcatccttatgtgg
aatacaatagaggcgcatgtccgctatgtcatcccagaggagctgaggggaggatcggtg
gtcggaaatatcgctaaagaccttggtttggatttatccgaggttgcagatcgtaaattg
cgaatagcctccgagtcgggtaagcagtacttcagcgtggccgcggacagcggcgagctt
attgtgaatgaaagaattgatagagagagcctttgtgggcacacagcgttgtgtttactg
ccactcgaagcagtcgtagaaaatcctctgcagttacatcgcgttgagattgaaatacaa
gacattaatgacaatactccgagttttaattcgaatcagcgcattttaaatattcctgag
tctataaaccctggcgcaaaatttctcctcgagagcgcggatgatcctgacgtcggatca
aattctttgcagtcttatactctgggaagcaataaatattttgtgttaaatgtaaaaact
caagatggcatcaaaattccggagttagtactggacaaaccgctcgatcgagaaaagcag
gctactcacaggcttgtactgacggcggtagacggcggaaaaccggtgagatctggcact
tgtgaagtcaatgtcatagttcttgatataaacgacaacgcgccgcagtttgagaagtct
ttttatgaagcaaacgtcgctgaaaatgagctcattggaaacgacattatcaaggttagc
gctgtagatgtagatgagggagcaaatggtgaaatcgagtacgtttttgcggacaaaaca
tctgatgcagtaaaagcagtttttgatattaacccgactacgggtgtgattagtgtaaaa
gggaagctcgattttgaacaagcaaatttatacaaattcgacctaatggccaaagacaaa
ggaaacccgcagatggaagggcactgcagtgtaaaaataatgatcagtgacattaatgac
aacgctccagaaatagtcattacatctctctccactccagtgcccgaaaattccccgaat
aacaccgtgattgcgctaattagcactaaagatgcagattctggtgaaaatggaaaagtg
aatctcaccgtggcatccggttcaccatttagactgaacccttctctatctaatcgttac
acactggttacaaacggtccactagatcgagagaaatatcctgagtacgagattaaatta
aatgcagttgattctggtgtgccagctctgcatgcagaaaaaattgtaaaaataagtatc
tctgatgtgaatgataatcctcccgttttctctcaaaagtcatatacagtttacacgaga
gaaaatactgctcatgggtcaatactgtgttctgtatcagcacatgacccggatcttgcc
caaaatgccaaaatttcctactccattttggactctaaagttcaagatgtttccatctca
tcatacatctacataaactcggataatggcagcattcacactatgcactcttttgactat
gagaaaatgaaagtgtttcagctgcaagtccaagcgaaagatcacggctctccgtctctg
agcagcaacgccacggttcatgtttttatcgtggaccagaacgacaacgcccccgctgtc
atttacccctccgcactcatgggctctgtgtctcatcagaggatgccccgctccgctaaa
gcaggacacctcgttactaaagtcacagcagtggacgctgactcgggccataacgcctgg
atttcctatcggctagcggaggccacggacgcgtctctcttcactgtcactttacacaca
ggagaggtgaggactaagcgctctgttgcagagcaggatgactcctctcagagactgctc
atagagataaaggacaacggagaaccggtgcagtccaccacagtcactgtggatatactg
atagaggacggctttcatgaaccagtctcagactttagacacaaaaacacagaacctgat
aagaaaagtagcaaaatcacattatatctcatcatttctctcgcctccgtctcactgctg
tgtttggtgacatttttggtcttattggtaaaatgtgctcgaagcagtagaggcagctcg
agttgctgtatcagacggagcgattgtgaatataaaaaccccaacagaaacctgcagatc
cagctcaacactgacggacccattaaatatgtggaggtgctgggaggagacatgatgtct
cagagtcagtccttcggctcctatctctctccaatgtccgaattcagtgatttcaccctc
gttaagcccagcagcaccacagactttacaaacactctgagcgtgctcgatgcgtcactt
ccggacagcacgtggacgtttgagagtcagcaggtgaggatttattga
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