Pangasianodon hypophthalmus (striped catfish): 113524316
Help
Entry
113524316 CDS
T05759
Name
(RefSeq) toll-like receptor 8 isoform X1
KO
K10170
toll-like receptor 8
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04142
Lysosome biogenesis
phyp04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
113524316
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113524316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
phyp04054
]
113524316
04090 CD molecules [BR:
phyp04090
]
113524316
Pattern recognition receptors [BR:
phyp04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
113524316
CD molecules [BR:
phyp04090
]
Proteins
113524316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
LRR_5
TIR
TIR_2
LRR_Zer-1
LRR_NXF1-5
LRR_6
LRR_12
LRR_9
Motif
Other DBs
NCBI-GeneID:
113524316
NCBI-ProteinID:
XP_026766312
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MEASKHWLMLVWWVLITFLIGLVLCTLDIKYLRTQPCDVHNYPNGTVEFNCRGRRLRDMP
VIFENTTSLDASENEIKNLTVESLKGRQKLINLNLNWMNRYHNLNITEGVFANLTKLKSL
RLNGLGLPEIPAQLPVSLKELRLDENNIFSLSPRNFSQLKNLTHLYLSKNCYYWNRCFMG
FKIDNGTFSSLHKLRHLSLSYNNLTHVPRALPVSLVTLELASNNISFIGEDDFTGLPNLK
TLKIQGNCPRCHNAPYPCTPCANGSIDIHERAFDHLRNLRILHLAGNSISVIKKAWFENI
SQLQQLYLSFNFLTGPITDGAFLSNLRFLEKLDLSFNYNLQAYPETVHLAPTFAKLYSLR
TLHIQGLVFKKIQNDSLAPLYGLQNLSTLDIGVNFIVHVDPDIFNKFVNLKLLYLSENRL
YPVTNSADRGPDNNIKPPRFNLPGLTDSSSKRKLDPYQPIRRLVKPECFAAGHVLDLSRN
NLFFISAKQFEGYKNIACLNLSRNGFASALNGTEFTSLPNLKYLDLSFNKIDLAYDYAFE
ELQELEVLDLSYNEHYFLVPGVTHNLKFIKNLPKLRVLNMSSNNIFTLTTKHMCSHSLAE
LQFQQNQLGRLWKDETYVKLFWNLTNLTHLDISHNSIKKIPTKVYKYLPVTIKRFRLNDN
FLTSLNWTLMRTFTQLEELILGYNSLTFVSKTITQNIPSLRYLDLSHNKISQLANGFLDG
AVNLNKLDLSYNKLSILNRSTFPSKETNHLDTLWLHKNPYRCTCDIMDFILWIFESEVKI
PNLVTSVKCNVPDATKGKGVVFFDIRECVDDHVASLIYFFTTLLVVGVTFVATLMHMFYW
DVSYVFYYMKAKFKGYQHLSSGDNVYDAFVTYDTKNPQVSEWVLNHLRVQLEEQGNHFLP
VCLEERDWLPGCPVLDSLTQSIRQSRKTVFVLTHSYVKSGSFKMAMYLAHQRLLDESEDV
IVLLLLEPVLQNTHFLRLRRRLCSHSVLEWPRTPAAEPWFWQCLRNAIRVENKAIMATRC
RSRARCQGRWLAVFSLAVCK
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggaggctagcaaacactggctaatgctagtatggtgggtgctaatcacgtttctgatc
ggcttggtattgtgcacgctggatataaaatacctgaggacccagccatgtgacgtccat
aattaccctaacgggaccgttgagtttaactgccgtggccgacgattacgagacatgcct
gtgatttttgagaacaccaccagccttgatgcatctgagaatgaaatcaagaacctgaca
gtggaatcgctgaaaggccggcaaaaattgataaatctcaatctaaactggatgaaccgc
tatcacaacctgaacatcactgagggagtttttgcaaatttgacaaagctgaaaagcttg
aggcttaatggattgggtctgccagagataccggcgcagcttccagtgtctctgaaagaa
ctgagattggatgagaacaacattttctcactgagtccccggaacttttcacagttaaaa
aatctgacccatctttatctatccaaaaattgctattattggaatcgctgttttatgggt
tttaagattgataatggcactttttcaagcttgcacaagttacgacatctgagtttgtcg
tataataacctcacccatgttcccagagctttgcctgtctccttagtaacacttgaactc
gcttccaacaatatatcgttcattggagaagatgatttcacagggctcccaaatctcaaa
acccttaaaatccagggaaattgtccacgctgtcacaatgctccatatccctgcactccg
tgtgccaatggttctatcgatattcatgaacgagctttcgaccaccttagaaaccttaga
atattgcatcttgctgggaattctatttctgtcatcaagaaagcttggttcgagaacatt
tcgcagctgcagcaactctacctttccttcaattttctgactggaccgatcacggatgga
gcgtttttgagtaacttaaggtttctggaaaaactcgatctctcgtttaattataattta
caagcatatccagaaaccgtgcacctagcaccaacctttgccaagttgtacagtcttcgc
acgctgcatattcaaggtttggttttcaaaaagatccaaaacgactcactggcacctctt
tatggtttgcaaaatctgtccactttagatataggagtcaattttattgtgcatgtggat
ccagatatatttaataaatttgttaatttaaaactgctgtatctatcagaaaaccgtctt
tatcctgtcactaactctgcagatagaggtccggataataacataaaaccgccacgcttc
aacctacctgggctgacagattcgagttctaaaaggaaactagacccttatcagcctatc
agaaggcttgtcaaaccagagtgcttcgcagctggccatgtgttagatctgagcagaaat
aatctgtttttcatttccgcaaagcaatttgagggatataaaaacattgcctgtctcaac
ctgtcccgcaatggcttcgcatcagcgttaaatggaacagaattcacgtcactgcctaac
ctaaaatatttagacttgtcttttaacaagatcgatttggcctatgattatgcgtttgaa
gaattgcaggagttggaggtgcttgacctcagctataacgaacattatttccttgtgcct
ggggtgacccataatttgaagttcataaagaacttacctaagctgagagtattaaatatg
agttccaacaacatttttacactaacgactaagcacatgtgcagccactcgcttgctgag
ctccagttccagcagaatcaactggggaggctttggaaagacgaaacatacgtgaaactt
ttctggaacttaacgaatctgacgcatctggatatatcgcacaacagcatcaagaagatc
cctacaaaagtctacaaatacttgcctgtcacaataaaaaggttcagactgaacgacaat
ttcctgacgagtctcaactggactttgatgaggacctttacacagcttgaagagctcatt
cttggctacaacagtctcacgtttgtctctaaaaccataacccagaatatcccgtccttg
cgttatcttgacctgagccataacaaaatctctcagctggccaacggatttctcgacggc
gccgtcaatcttaacaagctcgatctgagttataataaattaagcatccttaatcggtcc
accttcccatccaaggaaacaaatcatttggacactttgtggctccataagaacccctat
cgttgcacgtgtgacataatggactttatcctttggatttttgaaagcgaagtgaaaatc
cccaatctggtcacttcggtgaaatgcaacgtccccgatgcgactaagggcaaaggggtg
gtgttctttgacatcagagaatgcgttgatgaccacgtcgcctccctgatctacttcttc
accactttgctcgttgtgggcgtcacttttgtggcaactttgatgcacatgttctactgg
gacgtttcgtacgtgttctactacatgaaggccaaattcaaagggtaccagcacttgagc
tctggagataatgtctatgatgcctttgttacctatgacaccaaaaacccgcaggtctcc
gagtgggtcctgaaccatctccgggttcagctggaggaacaaggcaatcacttccttccg
gtctgtttggaagaacgtgactggctgcccggctgccccgtcctggacagcctgacccag
agcattcgccagagtcgcaagacggtcttcgtcctcactcattcctacgtgaagagcggc
tcgttcaagatggccatgtacctggcgcaccagcggctgctggatgaaagcgaggatgtg
atcgttctgctgctacttgagcccgtgctgcagaacacgcatttcctgcgcctgcggagg
cgactctgcagccacagcgtgctcgagtggccgcggacgcccgccgcggagccctggttc
tggcagtgtctgagaaacgcaattcgggtcgagaacaaggccataatggccaccagatgt
cgctctcgcgcacgttgtcaggggcgttggcttgctgtgttctcattggctgtatgcaaa
tga
DBGET
integrated database retrieval system
