KEGG   Pangasianodon hypophthalmus (striped catfish): 113524844
Entry
113524844         CDS       T05759                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phyp03036]
    113524844 (kdm6a)
Enzymes [BR:phyp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     113524844 (kdm6a)
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     113524844 (kdm6a)
   Histone demethylases
    113524844 (kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel TPR_1 JmjC KDM6_GATAL TPR_2 TPR_17 TPR_8 TPR_16 TPR_12 TPR_19 TPR_11 TPR_9 TPR_CcmH_CycH TPR_7 ARM_TT21_C ANAPC8 SNAP PPTA DUF7017
Other DBs
NCBI-GeneID: 113524844
NCBI-ProteinID: XP_026767004
LinkDB
Position
Unknown
AA seq 1434 aa
MKSWGVSVASAACTAAAAAAARSLGDDDEEKKMAARKPSESEEDFPKLTAEERECLAGVD
SSLFGFQRLHEDGARTKALLLKAIRCYDAYILKSEGKVEPEVFCQLGHFNLLLDNYPKAL
SAYQRYYSLQSDYWKNAAFLYGLGMVYFHYNAFQWAIKAFQEVLYIDPSFSRAKEIHLRL
GLMFKVNTDYDLSLKHFQLALIDSTPCTLSKAEIHFHIAHLYEIQKKYRAAKEAYESLLQ
TENLPVQVKATTLQQLGWMHHTVEQLGDKANKDSYAIQCLQKSLETDPDSGQSWYFLGRC
YSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHAA
AWMDLGTLYESCNQPQDAIKCYINATCSKSCSNVTALTARIKCLQAQLCNLQQGSLQSKS
KMLPSIEEAWSLPIPAELTSRQGALNTAQQQAGKSHQRGEGQSQLPAQSLPPHMLSSSQS
VDQSSPSKRKRTTSPSKNSADICTNSPVQQQVPNWFLTPQKLQHLEYLRANRANLKPVQL
QLLEQMEKQLILMQQHQQMRLAAVGEVRPTLSNGPCPKSDPSLPDSKSLPSPRHTPVALS
NTPNTTQPSFRTPCTLQPMANGPVPASPSPCSTAGALANTERNSVGNNHLPGQGSNGNVP
YLQQNALPRNCATPTSSSSTMNDQLWKSQHVNSTQGLNKSPGSHLAGPNGERPLSSTGTS
PPTCTSVPNECGYSAQEALNPLPSPPVPHSSTSGGQQGPAPTKESMPSSNGHLAGMPNST
ATAGRPNHVHQGLAGAAVPELCSPAQLSPDNLPLSALLMGKANSNDVSKDSGVAALGTTV
NSIHLQMGSKMQENSVASSPCSAMSTATPSPKSTEHNSAGSLNSPRLNGKGLEDSQSPMK
VDSPLVCSKAPTPSLVPWASVSIYPSSREVLKACRHLGKNGVSTSSILLDRCPPPRVPPS
PFPPLPKDKLNPPTPSIYLESKRDAFFPPLHQFCTNAANPVTVIRGLAGALKLDLGLFST
KTLVEANPDHLVEVRTQFSQPTDENWDITGTRKTWRCESSRSHTTISKYAQYQASSFQES
LREENEKKGQKEHSDTESAPAENLVRRRRGPFKHIKFGTNIDLSDERKWKLQLAELSKLP
AFARVVSAGNLLTHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWF
AVPESYWGVLNDFCEKNNINFLMGSWWPNLEDLYEANVPVYRFIQRPGDLVWLNTGTVHW
VQAIGWCNNVAWNVGPLTAHQYKLAVERYEWNKLQSVKSIVPMIHLSWNLARNIKVSDHK
LFEMIKYCLLKTLKQCQMLREALIAAGRELVWHGRTKDEPAHYCSICEVEVFNLLFVTSE
SNSRKTYVVHCQDCARRGSPNLDNFVVLEQYKIEDLMQVYDQFTLASPLPSSTS
NT seq 4305 nt   +upstreamnt  +downstreamnt
atgaaatcgtggggagtgtcagtggcctctgcagcctgcaccgctgctgctgctgctgct
gctcggagtctcggcgatgatgatgaggaaaagaaaatggcggcgcggaaaccgagtgaa
agcgaagaggactttccaaagctcacagctgaagaaagggaatgcttggccggcgttgac
agctcactgtttggatttcagaggcttcatgaagatggcgccagaacgaaggccttgctg
ttaaaggccattcgctgctatgatgcctacatcttgaaatctgaaggaaaagttgaacct
gaggtgttttgccagttaggccatttcaacctcttgctagacaattaccctaaagcatta
tctgcataccagaggtactacagtttacagtcagactactggaagaatgctgccttttta
tatggccttggcatggtttacttccattacaatgcgtttcagtgggcgataaaagccttt
caggaggtgctttacattgatcccagcttctctagagccaaggagatccatctgcggttg
gggctgatgtttaaagtcaacacagactacgacttaagcctaaagcattttcagcttgct
ttgatagactccacaccctgcactttgtctaaagctgaaattcacttccacattgctcat
ttatatgaaattcagaagaagtaccgtgcggcaaaagaagcatatgaaagtctgttacag
acagagaatcttccggtacaggtgaaggcaactactctccaacaactgggctggatgcat
cacacagtagaacagctaggagataaagctaacaaagacagctatgctattcagtgtcta
cagaagtctctggaaacagatcctgactctggacaatcttggtacttcctgggcaggtgc
tactccagtattggaaaggtccaggatgcgtttatttcatacaggcaatccattgataag
tcggaggctagtgctgatacatggtgctcaataggtgtgttgtatcagcagcagaaccag
ccaatggatgcacttcaggcctatatatgcgcagtacagctggaccacagccatgcagct
gcctggatggatttgggaaccctctatgagtcctgcaaccagcctcaggatgccatcaaa
tgctacattaatgccacctgcagcaagtcctgctctaacgttactgccctcactgcccgt
attaaatgcctacaggctcagttgtgtaatctacaacaaggtagtctacagagtaaaagt
aaaatgctccctagtattgaggaggcgtggagcctaccaattccagcagagcttacctcc
agacagggagccctgaacacagcacagcagcaagcaggaaaatctcatcagcgtggtgaa
ggtcagtcccagctcccagcacagtcactgcctccacacatgctctcctctagccagtca
gtcgaccagtccagtcctagcaagaggaagaggactaccagtccatccaagaactcagct
gatatctgcaccaacagtccagtccaacagcaagttccaaactggttcctaactccccag
aagcttcagcacttggaatatttgcgggctaacagagcaaacctgaagccagtgcagctt
caattgttagaacagatggaaaaacaactcattcttatgcagcagcatcagcagatgaga
ttggctgctgttggtgaagtgcggcccaccttatccaacggcccttgtccaaaaagtgac
ccatcactgcctgattcaaaatcgctcccatcaccgcgccatacaccagttgctctctcc
aacacacccaacaccactcagccctcatttcgtacaccctgcacccttcagccaatggcc
aacggacctgttcctgcgagcccctccccctgcagtactgctggagccctggctaacaca
gagagaaactctgtgggcaataatcacttaccagggcaggggagcaatggaaatgtgcct
tacctgcagcaaaacgcactacctcgtaactgtgcaacccctaccagcagcagcagcaca
atgaatgatcagctgtggaaaagccaacatgtcaactccactcaggggcttaacaaaagt
ccaggttcgcatttagcaggtcccaatggtgagcggccactttcttccacagggacgtct
ccacctacctgcaccagcgttccaaatgagtgtggatattctgcacaggaggctctcaat
ccccttccctctccccctgtccctcactcctctacctcaggtggacagcaaggccctgct
ccgaccaaagagagcatgccttcctcaaatgggcatttggcggggatgcccaacagcact
gccactgcaggacggcctaatcacgtccatcagggcctggcaggtgctgctgtgcccgaa
ctctgctcaccagctcaactcagtccagacaatcttccgctttcggccttgcttatggga
aaagccaatagtaatgatgttagtaaagacagtggggtggctgctcttggcacaacagtt
aacagcattcacctacaaatgggctctaagatgcaggagaactctgtggcttcatcaccc
tgctcggccatgtctacagccacaccttcacccaaatccacagagcacaacagcgctggc
agccttaacagccccaggctcaatgggaaaggcctggaggactcgcaaagcccaatgaag
gtggactctcctttagtctgctctaaagctcccaccccttcacttgttccgtgggcatct
gtctccatctacccaagctccagggaggtgcttaaagcctgcagacaccttgggaaaaat
ggtgtatccacgagtagcatcttattggacagatgtccccctccaagggtacctccttca
cccttccctccactaccaaaggacaaactcaacccccctacccctagtatttatttggag
agcaagagggatgcgttcttccccccacttcaccagttctgcactaatgcggccaatcct
gttacagttatccgaggccttgctggagcacttaagctggaccttggtctgttctccact
aagaccttggtggaggcaaacccagatcacctggtggaagtgaggacccagttctcccag
cccactgatgagaactgggacataactggcaccaggaagacatggcgctgcgagagtagc
cgatcccataccactatctccaaatatgcgcagtaccaggcctcctctttccaagagtcg
ctgcgtgaggagaatgaaaagaaaggacaaaaggagcactcagacacagaatcagctcct
gcagaaaatttggtacgacgacggagaggtccctttaagcatattaagtttgggacaaac
attgacttgtcagacgagcgaaagtggaagctacagctggctgagttgagtaagctgcct
gcatttgcccgcgtcgtttctgcagggaacctgctcactcatgtgggccataccatcctg
ggcatgaatactgtccagctctatatgaaggtcccaggaagcaggacaccaggtcatcaa
gaaaacaacaatttctgttcagtcaacattaacatcggcccaggagactgcgagtggttt
gctgtgcccgagtcgtactggggtgttctgaatgacttttgtgagaagaataacataaat
ttcctgatgggctcatggtggcctaacctggaagacttgtatgaagctaatgtgccagtg
tatcgcttcatccagagaccaggagacctggtgtggctaaacacaggcacagtacactgg
gtgcaggccattggctggtgcaataatgtagcctggaatgtaggccctctcaccgcacat
cagtacaagttggcagtggagcgctatgagtggaacaaactccagagtgtcaaatccatc
gttcctatgattcacctctcttggaacctggccagaaacattaaagtatcggaccacaag
ctctttgagatgatcaagtactgtttgctgaagacactgaagcagtgtcagatgctcagg
gaggcactgatagctgcaggcagggagctggtgtggcatgggaggaccaaggacgagcca
gcacactactgtagcatttgtgaggttgaggtctttaacctactgtttgtcaccagtgag
agcaactcgcggaagacatacgtggtgcattgtcaggattgtgctcgtcgaggcagtccg
aaccttgacaactttgtagttttggagcagtataagatagaggatctcatgcaggtctac
gaccagttcacattagcttcacctctgccttcctccacgtcttga

DBGET integrated database retrieval system