Pangasianodon hypophthalmus (striped catfish): 113525004
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Entry
113525004 CDS
T05759
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113525004
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113525004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Phage_MS2_lysis
Motif
Other DBs
NCBI-GeneID:
113525004
NCBI-ProteinID:
XP_026767220
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MKSSSPMIFLLNTWLSSSNDDHEMSWIPKVIKKRVCTAFVEDPLSNGDQCQCGGARGLHG
SVATGDYFGSAIVTQWDSSKHTSECPSDAFGELKFAGIARRQSHFLRLSCDTPASLVYAI
LTQHWGLPPPNLVVSVVGGVGQEKVRSWVREVVRQGLVRAAQSTGAWIVTGGLREGVGRC
VGEAVRDHGTAAASQSKVVALGVAPWGLVANRHQLVNAEGSFPARYYVQNTSRDSCYLDS
NYQAFLLVDDGSVGRRGGETSFITNLEKFISHQRTGIWGSGSIEIPVLCMLISGDASVLK
RMDMSLKKTTPWLVLNGSGPAADMISELLSDLSRAASPVDGEGRDSSSFNHELRDRVREI
IKKHFPLEKTLEKLVDQALSIYQKRSLITVFHGEQDSPDDFDTVILRALVRASKQVNSNS
SEYTEELKLAVAWNRVDIAKSELFNGDIQWKYDDLKDSMTDALVNDKPQFVRLFTENGLN
ILEYLTYERLESLYQSLSSSTLAYTLLQTWLRERHSLASSQTCSPDSDGGNCKGLKSPVT
GPSSARGLSLFEVSRLLGEVFGGMCQPFYYVPLGLEPGVSLRKAAKVRTHMFSACCQSNE
TRSLTLLIRMSPFWGGATCLQMATAADARLFFSHDGVQTLLAQIWWGDMHSRTEVWKLIM
TFFLPPLIYTNLITFREHQERHKDGLEGSRTVAFSLPDITQHMDDDIKLEDNAHGGEGDN
VDGSHIYSLTDITHTKSVMFDWSYEFGRSVLCVDYMVFTLRLIHIFAVNKHLGPKIIIVG
KMVKDVFFFLFFLGVWLLAYGVANQALIYAYDPRPYWVIRRVFYRPYLHIFGQIPLDEID
AHKRIQKVCTNNVTLIQQGAEPCPQSEANWLVLILLSIYLLVTNVLLLNLLIAMFRCCSA
SKLRLLDLRGRKASRLNTWEAVQKENLLSTQSKKLRDSDTERLRRTSAKSVSLTVTSTPD
LPLVFHMTTSTDHLIYLVIYISPYPSLLQLEYCSSSLSWIMEELAQSDLIKHTRRPPVHR
ESVPPTSPT
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccagcagtccgatgattttcctgctcaacacatggctgagttcctcaaacgat
gatcatgaaatgagttggatcccgaaggtgataaagaagagagtgtgcacggcgtttgtg
gaggatcctctcagtaatggagatcagtgtcagtgcggtggggctcgtggtcttcatggc
tctgtagctacaggtgattatttcggctctgctatcgtgacgcagtgggactcgtccaaa
cacacgtccgagtgtccatccgacgctttcggagagctcaagtttgccggcatcgctcgc
agacaaagtcatttcctgcgtctgtcatgcgacactcccgcttcgctcgtctacgccatc
ctgactcagcactggggtctgccgcctcccaacctggtggtgtcggtggtggggggcgtc
ggccaggagaaggtcaggagctgggtacgagaggtggtgagacaggggctggtgcgagcc
gcacagagcacaggtgcctggatcgtgacgggtgggctgagggagggcgtgggccgctgc
gtcggcgaggcagtcagggatcacggaactgcggctgcgtctcagtccaaagtggtggct
ctgggcgtggccccctggggcctggtggccaaccgacatcaactcgtcaacgctgagggc
agcttcccggccagatattatgttcagaacacgtcacgggactcgtgttacctggacagt
aactatcaggccttcctcctggtggatgatgggagcgtcggccgccggggtggagagacg
agcttcataaccaacctggagaaattcatctctcatcagcgcaccgggatctggggcagt
gggagtatcgagatccctgtgctgtgtatgctgatttctggcgatgcgtctgtgctgaag
aggatggacatgtctctgaagaagaccacgccctggttggtgttgaacggttcgggtcct
gcggcggacatgatctcggagctgctgagtgacctgagccgtgcggcgtctccagtggac
ggtgagggcagagacagctccagcttcaaccacgagctcagagaccgagtgcgagagatc
atcaagaaacatttccccttggagaaaacgctggagaagctggtggaccaggctctgagt
atctatcagaaaagatctctgatcacggtgttccacggggaacaggacagtcctgatgat
ttcgacacggtcatcctgagagccctggtgcgagccagtaagcaggtgaacagtaactcc
agtgagtacacagaggagctgaagttggccgtggcctggaacagagtggacatcgcaaag
agcgagctgttcaacggcgacatccagtggaagtatgatgatctgaaggactccatgacg
gacgctctggtgaacgataagcctcagtttgttcgtctcttcactgagaacggtctgaac
attctggagtatctgacgtatgagcgtttggagagtctgtaccagtctctctccagcagc
acgctggcctacaccctgctgcagacgtggctgagggagagacacagcctggcctcctct
cagacctgctctcccgactcggacggcgggaactgcaagggcctgaagagtcccgtgacg
gggccgtcgagcgcccgcgggctcagcctgtttgaggtttcacggttattgggggaagtt
ttcggaggcatgtgccagccgttttattacgtccccctcggcctggagcctggagtgagc
ttgaggaaagcagcaaaggtacgaacacacatgtttagcgcctgctgccagagcaacgag
actcgctccctcacgctgctcataaggatgtccccgttttggggcggagctacgtgtcta
cagatggccacggcggccgacgcacgactcttcttcagccatgacggtgtgcagactctg
ctggctcagatctggtggggtgacatgcacagccgcactgaagtgtggaaactcatcatg
acgttcttcctacctcctctcatctacaccaacctcatcaccttcagagagcatcaggag
agacacaaagatggtttggaggggtcgcgcaccgtagcgttctctctgcctgatatcaca
cagcacatggatgatgacattaaattggaggataacgctcacggtggagaaggggacaat
gtcgacggcagtcacatctattctctcactgacatcacacacacgaagtctgtgatgttc
gactggtcgtatgagttcggtcgctcggtgctgtgtgtggactacatggtcttcactctt
cgactcattcacatcttcgccgttaacaaacacctcggacccaaaatcatcatcgtcggc
aaaatggtgaaggatgttttcttcttcctgttcttcctgggagtctggctattggcttac
ggcgtggccaatcaggcgctgatctacgcctatgaccctcgaccttactgggtgattcgc
agagttttctacagaccgtacctgcacatcttcgggcagatcccactggatgaaatagat
gctcataagcgtatacagaaggtttgcaccaacaacgtgactctgatccagcagggagcc
gaaccgtgtccgcagtcagaagccaactggctcgtcctcatcctgctgtccatctacctg
ctggtcaccaacgtcctgctgctcaacctcctcatcgccatgttcaggtgttgctccgcc
tccaagctaagattgttggatctgagaggtaggaaggcgagcaggttgaacacgtgggaa
gcggtacagaaggagaatttgctctcgactcagagtaagaagctcagagacagcgacacc
gagcgactcagacgcacgtctgccaagtcagtatctctcactgtcacgtctacacctgac
ctgcccctggtttttcacatgaccacgagcactgatcatttaatttatctcgtcatttac
atctctccttatccgtctctcttgcagttggagtactgctctagctccctctcgtggata
atggaagaactggcgcagagtgacctgatcaaacacacccgtcgcccccccgtccaccga
gagtcggtcccaccaacttctcccacatga
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integrated database retrieval system
