Pangasianodon hypophthalmus (striped catfish): 113526552
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Entry
113526552 CDS
T05759
Symbol
pkp1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113526552 (pkp1)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
113526552 (pkp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
HEAT
ARMC9_ARM
HEAT_2
Motif
Other DBs
NCBI-GeneID:
113526552
NCBI-ProteinID:
XP_026769505
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MTQEPLRSALSIGEIGETSLALPSDGDSRSGQRRVMEQVSTMKKSKSKYSSSRGSAGTLS
PTSPKSDSVFYESKFSPTNLNGSDFLFESTLANGHAKTMKQKQSIMQRSVSTRSANYYRM
PSNNILPNSLPAPSHPSAQADLYATQVGTKSNTTQWTQKYRQKKILERSHSQPPLTSPVQ
IKANSSFQSTSNQVTGSNTVNRRPPSAHSNSEPKFSAVSKTKTEMNGMNGEANMSDITLS
EAIFCINHVDERYQLHGASVIQHSTYTDDKAKEEVRKRNGIAPLVSLLSSSNPQIQLASA
SALRNLVFKNSANKEEVRCTGGLNEALQLLRDTNSAEIQKHVTGLLWNLSSEESIQPDLL
RQALPVLTETVLQPNADTSAIGSDIEPRTESFCNATACLRNLSSGKLVNRQALRNCEGLI
DSLVTHLQSCVDDGNMDDKSVENCVCVLHNLTYQLETEVPALFTKINALATASESRTNAA
DTGPIGCFSNQSRKIQQESNSEYLLMDDFNPKGKSRLIHSKTLQLYLNLLQSSQNTRTQE
ACCGALHNLTAKKGIVSDVLSQTIVQKLNGLQSLSPQLQSQNLALNNSVTTLIGNLSRTP
QLHRVLARQALPGIVKTLTSDLTQESDSTIAVACHTANNLLRAEPEMGKKLLSNALINSL
NNMSQNIAMPKASKAAGVLLHSLWSDKTIQSFLKKQGMNKKVFVNETTSAALRSFQIIE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaccgttgagatcggctttatctatcggggagatcggagagacgtcgctg
gcgcttccgtcagacggagattcccgctcgggccagaggcgcgtcatggagcaggttagc
accatgaagaagagcaagagcaagtacagcagcagcagaggatcagcaggaacactgtcc
cccaccagccccaagagcgacagtgttttttatgaatccaagttctcccccaccaatcta
aatggatcggactttttgtttgaaagcaccttggcaaatggacatgcaaaaacgatgaaa
cagaagcagagcataatgcaaaggagcgtgagcaccaggtcagccaactattacaggatg
ccaagtaacaacatattaccgaacagccttcccgctccaagccaccccagtgcccaggct
gacctctatgccactcaagtgggcactaagagtaacaccacccagtggacccagaagtac
aggcagaaaaaaatcctggaaaggagtcacagccaacctccactcaccagccctgtccaa
attaaagcaaatagcagctttcagagcaccagcaatcaggtcactggcagcaataccgtc
aacaggcggcctccttctgcccactcaaactctgagcccaagttctcagcggttagcaag
accaagactgagatgaacggaatgaatggagaggcaaacatgtctgatatcacattatca
gaggcgatattctgcatcaaccacgtggatgaaaggtatcagctgcatggagcttccgtt
attcagcatagcacatacacagatgacaaggccaaagaagaggtacggaagcgaaatggc
attgctccgttggtgtccttgcttagcagctcaaaccctcagatccagctagcgtcagcc
tccgccttgcgtaaccttgtcttcaagaattcagccaacaaggaggaggtccggtgcaca
ggagggttgaacgaggctttgcagctactccgagacactaactcagccgaaattcagaaa
catgtgaccggtcttctgtggaacctgtcctcagaggagagcattcagcccgatctcctc
cgtcaggctctgcctgtcctcaccgagacagtgctgcagccgaacgcagacacctcagcc
atcgggtctgatattgaacctcgtactgagagcttctgcaatgctacagcatgtctacga
aatctgagttctggcaaactggtaaaccggcaagccttgcgtaactgtgagggcctgatt
gactcactagtcacacacctgcagtcttgtgtggacgacggcaatatggatgataagtct
gtggagaactgtgtgtgtgttctgcacaacctcacctatcagctggaaaccgaagtgcct
gctttgtttaccaagataaacgcgctggctacggcttctgaaagccgcactaatgccgct
gataccggccctatcggctgctttagcaaccagagccgcaagatccagcaagagagcaac
tcagaatacctgctgatggatgatttcaatcccaaaggcaagagccggcttattcactca
aagactctgcagttgtatctgaatctgctgcagtccagtcagaacacaagaactcaggag
gcatgctgtggagcactgcataacctcaccgccaagaagggcatcgtgtcagatgtgttg
agtcagaccattgttcagaagctgaatggtctgcagagcctctctccacaactacagtca
cagaatctggccctgaacaacagcgtcaccacactgatagggaacctgtctcgaactcca
cagctgcacagagttttggctcgtcaggctcttccgggtatcgtcaagaccttgacatcc
gaccttactcaagagtctgatagcaccatagcagtggcctgccacacggcaaacaacctg
cttagggcagaacctgagatggggaagaaactgctaagcaatgccctgatcaactcactg
aataacatgagtcaaaacatagccatgccgaaggccagtaaggcagcaggagttctcctt
catagcctctggtctgacaagactattcagagtttcctcaagaagcaagggatgaataag
aaggtctttgtgaatgagacaacttcagctgcactcaggtctttccagattattgagtaa
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integrated database retrieval system
