Pangasianodon hypophthalmus (striped catfish): 113527078
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Entry
113527078 CDS
T05759
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00514
Other types of O-glycan biosynthesis
phyp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
113527078 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113527078 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
phyp01003
]
113527078 (rfng)
Enzymes [BR:
phyp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
113527078 (rfng)
Glycosyltransferases [BR:
phyp01003
]
Glycan extension
O-Glycan
113527078 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
113527078
NCBI-ProteinID:
XP_026770377
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MHLSPVGTNRRCFLASSALCAIVLLLIPTLQTPQRQGELPRPLPQTRPARGQNTTGYKGA
SKAKHGRVIGLPFPSDKSQRDSVGADFLSSHSKEPLGLKDIFIAVKTTRKYHKSRLELLF
QTWVSEAKVQTFIFTDGEDKELKQKAGGNVINTNCSAAHTRQALCCKMSVEYDKFIESQK
KWFCHVDDDNYVILPSLLQLLSSYSHTQDVYLGRPSLDHPIEAPERVRSDGSTSVKFWFA
TGGAGFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTIGYIIEALLEVPLIHTNLFHS
HLENLQRMRAADVFKQVTLSYGGFENRRNVIPIAGAFSLTEDPSRFKTVHCLLYPETEWC
LRDSHR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtctccggttggcacaaacagacgttgcttcctggcctcttcggccctctgt
gccatcgtgctgctgctgatcccaaccctccaaacgccacagcggcagggcgagctgccc
cgacctctgccccaaaccaggcctgccagaggacaaaacaccactggctacaaaggtgct
agtaaggctaagcatggcagagtcattgggctaccctttcctagtgacaaatcccaaagg
gactctgtaggtgctgacttcctcagctcacactccaaggagcctctgggactgaaagac
atttttattgcagtcaaaaccaccaggaagtaccacaaatcacgcctggagcttcttttt
cagacctgggtgtcagaagccaaggtgcagacgtttatcttcacggatggtgaggataag
gagctgaagcagaaagcaggaggcaatgtcatcaacaccaactgctcagctgctcacaca
cgacaggcgctgtgctgcaagatgtctgtggagtacgacaagttcatcgagtcacagaaa
aaatggttctgtcacgtggatgacgataattatgtcatcctgccgagtttgctgcagctg
ctctcatcctattcccacacgcaggatgtgtacctgggccggcccagtctcgatcaccct
atagaggctcctgagagggtcaggagtgatggatcgacgtctgtcaagttctggtttgct
actggaggtgctggcttctgtatcagtcgaggcctggcactcaagatgagtccatgggca
agtctggggaacttcatcactacagcagagaagatccgtctcccggatgactgtacgatc
ggttacatcatcgaggcgctgctggaggttcctctgatacacaccaacctcttccactca
catctggagaacctgcagaggatgcgtgcggcggacgtcttcaaacaggtcactctcagc
tatggtggttttgagaacaggaggaatgtgatacctattgccggagcattctccttgaca
gaggacccttcacggtttaagactgttcactgcttgctttatcctgagactgaatggtgt
ctccgcgacagtcatcgctga
DBGET
integrated database retrieval system
