KEGG   Pangasianodon hypophthalmus (striped catfish): 113527080
Entry
113527080         CDS       T05759                                 
Name
(RefSeq) interferon regulatory factor 3-like
  KO
K05411  interferon regulatory factor 3
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04620  Toll-like receptor signaling pathway
phyp04621  NOD-like receptor signaling pathway
phyp04622  RIG-I-like receptor signaling pathway
phyp04623  Cytosolic DNA-sensing pathway
phyp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    113527080
   04621 NOD-like receptor signaling pathway
    113527080
   04622 RIG-I-like receptor signaling pathway
    113527080
   04623 Cytosolic DNA-sensing pathway
    113527080
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113527080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:phyp03000]
    113527080
   04131 Membrane trafficking [BR:phyp04131]
    113527080
Transcription factors [BR:phyp03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    113527080
Membrane trafficking [BR:phyp04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    113527080
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 113527080
NCBI-ProteinID: XP_026770382
LinkDB
Position
Unknown
AA seq 466 aa
MAQPKPLFIPWLKQQIDSGRYPGVQWVNQERTKFSIPWKHALRQDSNSDDILIFKAWAQT
SAGSNGQIPGDHSVWKRNFRSALRARGFKIVEDNKNDTANPHKIFMWPDDSQSGASTTDS
PVCNSEISLGGTLYLGEDELFPCGSPQPDLLQQCLAGLNIVESQPEMPVDHAMFVREPVQ
HPMNAAICDAPFPIQETSNMSHFSPGDGAMAGAGQISPAEGTLALDQYSPLEGAFLGTQQ
PTPQAAPEPEMPVHTTSNDSGCNQFGTHFLVNVYYRGRQVLNQMVENEAGFCLVFRKDPS
LMASPLPVVELPGTESILDQTQAQSTQEILNNLGGLVVKREGGMLLGYRWGDSRVYWGLD
KHEQRPTTRPLSKNNPEPIYSLKDFVSGMMEFIQNRGQSPSYSLYFFLGQQWPDPKNKPW
EKKLIMVEVVLTALEKLKMMAVANGASSLQSSMELQISLEQMMEMW
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggctcagcccaaaccactcttcattccctggttgaagcagcagattgatagtggacga
taccccggcgttcagtgggtcaaccaggaacgcacaaaattcagcattccttggaagcac
gctttgaggcaggactccaacagtgatgacatccttatattcaaggcatgggcacagacg
agtgctggctccaacggccagataccaggtgaccactcagtgtggaaaagaaacttccgc
agtgctctcagagcccgaggcttcaagatagtggaagataacaagaacgatactgctaac
cctcacaaaatcttcatgtggccagatgactcacagtctggggcatctaccacggattca
ccagtgtgtaatagtgaaatttctcttggtggtaccctgtacctgggagaagacgagttg
tttccgtgtggaagcccgcagcctgatttgttgcagcagtgccttgcgggtctgaatatt
gttgaatctcaaccagagatgcctgtggatcacgcaatgtttgtgagggaaccagtacaa
catcccatgaacgcggctatctgtgacgctccatttcccattcaggaaacttcaaacatg
agccacttttctccaggtgacggcgctatggctggggcaggacagatttctcctgctgaa
ggcacattggctctggaccaatattctccactagagggcgccttcttgggcacacagcag
cccacgccgcaggctgctcctgagccggaaatgcctgttcacaccacttctaacgactca
ggctgtaaccaatttgggacccattttctggtgaatgtttattacagagggaggcaggtg
ttaaatcaaatggtggagaatgaggctggtttctgcctagtgtttaggaaagaccctagc
ctaatggcaagcccacttcctgttgtggagctccccggcacagagtctatactggaccag
acccaggcccagtcaacccaggaaattttgaataatctgggtgggttggtggtgaagcgg
gagggcggcatgctgttgggatatcgttggggagacagtcgtgtttactggggactagac
aaacacgagcagagacccacaaccagaccactctccaaaaacaaccctgaacccatctat
tcccttaaagactttgtgtcaggcatgatggagtttattcagaaccgtggacagtctcct
tcatactcgctctatttctttctgggacaacagtggcccgaccccaagaacaaaccatgg
gagaagaagctgataatggtagaggtggttctcactgctctggagaagctgaagatgatg
gccgtggcaaacggtgcgtcctcactgcagtcatctatggaattgcagatttccttagag
cagatgatggaaatgtggtag

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