Pangasianodon hypophthalmus (striped catfish): 113527479
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Entry
113527479 CDS
T05759
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04140
Autophagy - animal
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113527479 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113527479 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113527479 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113527479 (plekhm1)
Membrane trafficking [BR:
phyp04131
]
SNARE
SNARE associated proteins
Others
113527479 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
113527479 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
FEZ
Motif
Other DBs
NCBI-GeneID:
113527479
NCBI-ProteinID:
XP_026771142
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MLATQLADSVLEAKNVKQWIKEKIAQTLKTLQKRYVTTDAPVTSEDSEANQLCCALEAVF
IHGLRSKHIRTDGAGARNRKGGSLPQPVFWNLLKTITHRDVILELEGLSFINTDVGRCRA
WVRLALNDGLLECYLTSLLRESTKLEAHYQPGALLLDPEEREVLLSLLQGLASLAFQLSY
KSAMLNEWTTTPLALAGLCPPLSTDDLWPPSSRRESWDTASQSSGSGGSGRGQEGRTPSD
LSLDTAGSCHLSSSFGSERESWSCQTENKSALGETSSSSSQDIIKDLDVLSPAADSLIES
STHSSSDEDSSNKQDIHQMLEPSMDSSVPNANSVVLEAEPLVEELEEHATACVNISPIDV
ESCIVEDQKQDEDSTAISFDSSTPMLTCQVTSDSLAHNTLAPLISSDVELVKNSEHASFH
HTSNALSRKTSAGSVCSHHKPESWISEEDIYKPDTYASGDSEDPDIVESAQINGMVSPVA
ETESHQSPPSVVRRRQIGLSNPFRGLLKLGQLERRGPVGLWRACHCELSPFELRLYADDD
ERNICENRSLLRCEDVHLGSDGRFHLEFPGKRLQLRAPSKAEAEDWVERILEAVSNVRHQ
LRDDWDDLSPSIMPVSIPPEPSNLPETDWSRPCEPEPEAIKETVVFLSREEQGWRLMVLS
LSLEALQGFSMQNGCKTRIFSHGIDSVRDVVPAVALGGPAFFKVLTAKETLTVRAESGEE
AHAWRSIIRGALDSYLEEGNETGGEMSSVSGGNIHRLVQHRLKGDAVLLPYLTVVPKEKG
LNAQNFKCAGCPRQIGVSLGRARLCEFSGQYYCDVCHHGDTTIIPSRVVHNWDLTAREVS
RQALKLLADIEQEPLLNLDLLNPDLFDHSETMATVQRFRQILRLLGDYLIICRSGIRKKV
EARLQQRTYLLESSHLYSVLDFRQIADSQYESFLQSLIQFSCNHVHHCDLCTQRGFICQI
CNVDDIIFPFQFDTTSRCKACKTVFHSSCKAQSVTCPRCERLQRYKERDFLE
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcaacacagctcgctgattctgttctagaggccaaaaatgtcaaacagtggatc
aaggagaagatagcacagacactgaagacgctgcagaagcgctacgtgaccacagatgcc
ccagtgaccagtgaggactctgaggccaaccagctctgctgtgctctggaagccgtcttc
attcatggcctccggagtaaacacatccgcacagatggagcaggagcacgcaaccgcaaa
ggaggctcacttcctcagcctgtcttctggaacctgcttaaaaccatcactcacagagac
gtgattctggagctagagggcctgagcttcatcaacacagatgtaggccggtgcagggca
tgggtgcgtttggcactgaacgatggactattggagtgctacctgacttcacttctccgt
gagagcaccaagctggaggcccactaccagcctggtgcactgctccttgaccctgaagag
cgtgaggtgctgctcagccttctgcagggcctggcctcgcttgctttccagctctcctac
aaatctgcaatgctcaatgagtggaccaccacaccgctggcacttgccggtctatgtcca
ccactgtctactgatgatttgtggcctccctcttcacgccgagaatcctgggatactgca
tcacagtcatctggatcagggggctcagggagaggtcaggaaggcaggacgccctcagac
ctcagcctggacacagcaggctcgtgccatctctcttccagctttggttcggagagagag
agctggagctgccaaacagagaacaagagtgcacttggagaaacgagtagctcctctagc
caggatataataaaagaccttgatgtgcttagccctgctgcagacagcttgattgaatcc
tccactcacagcagtagtgatgaagactcatctaacaaacaggatatacaccagatgctt
gaaccttccatggattcatctgtccccaatgcaaactcagttgttttggaggcagagcca
ttagtagaggaattagaagagcatgcaactgcatgtgtaaatataagcccaatagatgtt
gagtcttgcatagtagaagatcagaagcaggatgaagactctactgccatttcctttgat
tcctccacccctatgttaacctgtcaggtgacttccgattcattggctcacaacactctt
gctccattgatttctagtgacgtcgagctggtaaaaaactcggagcatgcttctttccat
cacacttctaatgctctgagcagaaaaacatctgcaggctctgtctgttctcaccataag
cccgagtcctggatctcagaggaggatatttataagccagatacttatgcaagtggtgat
tctgaagatcctgatattgtagaatccgcccagattaatgggatggtatctcctgttgct
gaaactgaatcccaccaatctccacctagtgtggttcgtcgcaggcagattggcttgtca
aacccgtttcgaggccttctaaagctgggccagctggagcggcgtggtcctgtgggactg
tggcgcgcctgccactgcgagttgtcaccatttgagctgcgcctatatgctgatgatgat
gagcgtaacatctgtgaaaatcgctcactgctgcgttgtgaggatgtacacctgggctcc
gatggccgcttccatctcgaattccctggaaagaggctccagttgcgggcaccaagcaag
gctgaggctgaggactgggtggagcgcattttagaggctgtgagcaatgtgcgacaccaa
ctgcgtgacgactgggatgacctctcgccctctatcatgcctgtctccatacccccggag
ccatctaatctgcctgaaacagactggagcaggccctgtgaaccagaaccagaggccata
aaggagacagtggtgttcctgagccgggaggagcaagggtggcgtttgatggtgctttct
ctctcgctggaggcgcttcaaggtttttcaatgcagaatgggtgtaaaacacgcattttc
tctcatggcatcgattctgtgagggatgttgtgcctgccgtggcattgggtggccctgca
ttcttcaaggtgctgacagcaaaggagacacttacggtgcgggccgagagtggcgaggag
gcgcatgcctggaggagcattatccgaggggcgctagattcatatctggaagaggggaac
gagacaggaggtgaaatgtcatcagtgagtggaggcaacatccacagacttgttcaacac
aggctgaagggggatgcagtgctgctgccttatctgacagtcgtccctaaagaaaaagga
ctaaatgcacagaacttcaaatgtgcaggctgtcccaggcagattggtgtatctttggga
cgagccaggttgtgtgagttctcaggtcaatactactgtgatgtctgtcaccacggtgac
accaccatcatcccctctcgcgtggtacacaactgggatctcactgcacgtgaggtctcc
aggcaggccttgaagctgctggctgacattgagcaggagcccttgctgaaccttgacctg
ttaaaccctgacctgtttgatcactctgaaaccatggcaacagtgcaacgcttcaggcag
atactccgcctccttggagattacctgatcatttgtcggagtggaatccggaagaaagtc
gaggccaggttacagcagagaacctacctattggaatcaagtcatctatatagcgtgctg
gatttcaggcagatagcggacagccagtatgagtccttcctgcagtctctcatccagttc
tcatgcaatcatgtgcatcattgtgacctttgcactcagcgaggcttcatctgccagatc
tgcaatgtggacgatatcatttttccttttcagttcgacaccacctctaggtgtaaggca
tgcaaaactgttttccactcctcctgtaaagcccagagtgttacctgtcctcgctgtgaa
cgtctgcagagatataaggagagagactttcttgaataa
DBGET
integrated database retrieval system
