Pangasianodon hypophthalmus (striped catfish): 113528535
Help
Entry
113528535 CDS
T05759
Name
(RefSeq) uncharacterized protein LOC113528535 isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
phyp04510
Focal adhesion
phyp04540
Gap junction
phyp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113528535
04020 Calcium signaling pathway
113528535
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113528535
04540 Gap junction
113528535
09142 Cell motility
04810 Regulation of actin cytoskeleton
113528535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
phyp04052
]
113528535
00536 Glycosaminoglycan binding proteins [BR:
phyp00536
]
113528535
Cytokines and neuropeptides [BR:
phyp04052
]
Cytokines
Growth factors (RTK binding)
113528535
Glycosaminoglycan binding proteins [BR:
phyp00536
]
Heparan sulfate / Heparin
Growth factors/receptors
113528535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
113528535
NCBI-ProteinID:
XP_026772940
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MSTGLCWLRALLLAACLCFGGAERDPLPVALAELMKSGSVSSTEDLQLLLLSDSVDDDPE
SDHANNTNNRLPRSLLDAQPAQQAQCKVRTEVMEVTRSMLDRSNANFLLWPPCVEVQRCS
GCCNTKNLKCVAVLTHTRYLQVMKIQYVNMRPVYNKAIVSVNDHVECRCQPAPRPASRRK
SPAHKQEVRDRSGKPRYKDELHRRDELKPNQRLKLEDLLSHSWLPLENGHDAWSHNKTHH
GKSRDHSLGDGRKYNSSSNGTNGWSSEKLTNPLPSHIKREDTGILLHNVTRARERVKEKE
AKDVEIQKNSTVNDGRLTNQSLVNGVSPTEITNQIPQHESELIQCAGHSKSAEGSQEHRN
ETISQMETTQNQTHSEAHVGQTNQTTVSKTADKTNQKQGHAFNAEKEPSTRIKGNETPEM
VSTQEETEGTRSRSTLLKERKALEEEKEELLLLHRRLDEEKHKHFLKTQLHSQHEDQKQH
QLHHKPQQTHTTTQRTEIRTTTPVRVSTPHTHPRLPPRPPKRLRKHRNRISKAVMRAMLM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgggctctgctggctgcgcgcgctgctgctcgcggcgtgtctgtgcttcggc
ggcgcagagagggatcctctccctgtagctctggctgagctgatgaagagcggctctgtc
tcctccacagaagatctgcagctgctgctgctctctgactccgtagatgacgatccagag
agcgaccatgccaacaataccaacaaccggctgccaaggagccttctggatgctcagcca
gcacagcaagcccagtgtaaggtgaggacagaggtcatggaggtcacccgctctatgctg
gaccgtagcaatgctaactttctgctatggccaccatgtgtggaggtgcagagatgctct
ggttgctgcaacacaaaaaaccttaagtgtgtagctgtactcactcacacgcgctatcta
caggtgatgaagatccagtatgtgaacatgcgcccagtttacaataaagccatagtctca
gttaacgatcacgtggagtgccgctgtcagcctgctcctcgtccagcctcccgcagaaag
tctcctgctcacaaacaagaagtaagagatcgctcaggtaaacctcgctataaagatgag
cttcaccggagagatgagcttaaacccaaccagaggcttaaactagaggatctgctaagc
cacagctggctgcccctagaaaatggacacgatgcctggagccataataagacgcaccac
ggaaagagcagagatcattcccttggagatgggaggaagtataacagcagctcgaatggc
acaaatggctggtcttctgagaaactgacaaatcctctgcccagtcacattaagagagaa
gatacaggtatattactacacaatgtgacaagggcaagagagagagtgaaagagaaagag
gccaaagatgtagaaatacagaaaaacagtacagtaaatgatggtaggctgactaatcag
tcattagtgaatggggtcagccccactgaaataaccaatcagattccacagcatgagtca
gagctaatacaatgtgcaggccacagcaaaagtgccgagggcagtcaagaacacagaaat
gagactatttcccagatggagaccacccagaatcagacacacagtgaagcacatgttggg
cagaccaatcagactacggtttctaaaactgcagataaaaccaatcaaaagcaaggccat
gcctttaatgcagaaaaagaacctagtactagaataaaaggaaatgagaccccagagatg
gtgagcactcaagaggagacagaggggaccagaagcaggtccactttgctgaaggaaagg
aaggctttagaggaggagaaagaggagttgctgttacttcacagacgccttgatgaagaa
aagcacaaacatttcctgaaaacacaactacacagtcaacatgaggaccaaaaacagcac
cagctgcaccacaaacctcagcaaacccacacaactacacaacggacagaaattagaaca
actaccccagtcagagtgtccactccacacacacatccccgactgccccctcgtccacca
aagagattgaggaaacatcgcaaccgcataagcaaggctgtcatgagggccatgctcatg
tag
DBGET
integrated database retrieval system
